Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC18.47■□□□□ 0.55
COL22A1Q8NFW1 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL22A1Q8NFW1 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL22A1Q8NFW1 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.47■□□□□ 0.55
COL22A1Q8NFW1 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL22A1Q8NFW1 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC18.47■□□□□ 0.55
COL22A1Q8NFW1 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL22A1Q8NFW1 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL22A1Q8NFW1 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL22A1Q8NFW1 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC18.47■□□□□ 0.55
COL22A1Q8NFW1 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC18.47■□□□□ 0.55
COL22A1Q8NFW1 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC18.47■□□□□ 0.55
COL22A1Q8NFW1 TCAF2P1-201ENST00000291129 2421 ntBASIC18.47■□□□□ 0.55
COL22A1Q8NFW1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
COL22A1Q8NFW1 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.47■□□□□ 0.55
COL22A1Q8NFW1 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL22A1Q8NFW1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL22A1Q8NFW1 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.47■□□□□ 0.55
COL22A1Q8NFW1 AC089987.1-201ENST00000551654 2209 ntBASIC18.47■□□□□ 0.55
COL22A1Q8NFW1 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC18.47■□□□□ 0.55
COL22A1Q8NFW1 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 YBX1P3-201ENST00000468366 909 ntBASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 RN7SL479P-201ENST00000472003 300 ntBASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 AC133555.4-201ENST00000569081 152 ntBASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 AL078624.1-201ENST00000604004 547 ntBASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 AL022313.4-201ENST00000562756 2046 ntBASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 WARS-203ENST00000358655 2466 ntTSL 2 BASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL22A1Q8NFW1 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.54
COL22A1Q8NFW1 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC18.46■□□□□ 0.54
COL22A1Q8NFW1 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
COL22A1Q8NFW1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 ACTG1P23-201ENST00000437653 1074 ntBASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 RPSAP16-201ENST00000447583 821 ntBASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 RPL3P9-201ENST00000463217 1183 ntBASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 MTHFD2P7-201ENST00000483867 983 ntBASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 AC114812.4-201ENST00000506676 757 ntBASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 AC138035.3-201ENST00000622706 2791 ntBASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 AP001331.1-201ENST00000413008 1015 ntBASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 DUX4L31-201ENST00000446466 1136 ntBASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 HNRNPA1P73-201ENST00000446472 928 ntBASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms