Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
FREM3P0C091 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.14□□□□□ -0.31
FREM3P0C091 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
FREM3P0C091 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
FREM3P0C091 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.14□□□□□ -0.31
FREM3P0C091 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.14□□□□□ -0.31
FREM3P0C091 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
FREM3P0C091 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FREM3P0C091 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FREM3P0C091 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
FREM3P0C091 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
FREM3P0C091 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FREM3P0C091 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
FREM3P0C091 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.13□□□□□ -0.31
FREM3P0C091 CEP164P1-201ENST00000455142 418 ntBASIC13.13□□□□□ -0.31
FREM3P0C091 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 SORD2P-201ENST00000558556 1069 ntBASIC13.13□□□□□ -0.31
FREM3P0C091 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
FREM3P0C091 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.13□□□□□ -0.31
FREM3P0C091 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 AC009884.2-201ENST00000603110 324 ntBASIC13.13□□□□□ -0.31
FREM3P0C091 AL132994.2-201ENST00000603120 687 ntBASIC13.13□□□□□ -0.31
FREM3P0C091 YRDCP1-201ENST00000621419 643 ntBASIC13.13□□□□□ -0.31
FREM3P0C091 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.13□□□□□ -0.31
FREM3P0C091 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
FREM3P0C091 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
FREM3P0C091 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
FREM3P0C091 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.13□□□□□ -0.31
FREM3P0C091 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.13□□□□□ -0.31
FREM3P0C091 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.13□□□□□ -0.31
FREM3P0C091 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
FREM3P0C091 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.13□□□□□ -0.31
FREM3P0C091 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
FREM3P0C091 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.13□□□□□ -0.31
FREM3P0C091 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
FREM3P0C091 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.13□□□□□ -0.31
FREM3P0C091 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.13□□□□□ -0.31
FREM3P0C091 CICP4-201ENST00000447359 2812 ntBASIC13.13□□□□□ -0.31
FREM3P0C091 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
FREM3P0C091 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.13□□□□□ -0.31
FREM3P0C091 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.13□□□□□ -0.31
FREM3P0C091 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.13□□□□□ -0.31
FREM3P0C091 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.13□□□□□ -0.31
FREM3P0C091 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.13□□□□□ -0.31
FREM3P0C091 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.13□□□□□ -0.31
FREM3P0C091 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.13□□□□□ -0.31
FREM3P0C091 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.13□□□□□ -0.31
FREM3P0C091 CMC2-224ENST00000630396 481 ntTSL 5 BASIC13.13□□□□□ -0.31
FREM3P0C091 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
FREM3P0C091 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.13□□□□□ -0.31
FREM3P0C091 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.13□□□□□ -0.31
FREM3P0C091 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FREM3P0C091 KRT8P31-201ENST00000504812 1408 ntBASIC13.13□□□□□ -0.31
FREM3P0C091 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
FREM3P0C091 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FREM3P0C091 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
FREM3P0C091 CAP2P1-201ENST00000557743 1390 ntBASIC13.12□□□□□ -0.31
FREM3P0C091 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
FREM3P0C091 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.12□□□□□ -0.31
FREM3P0C091 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.12□□□□□ -0.31
FREM3P0C091 AHCYP4-201ENST00000419201 1315 ntBASIC13.12□□□□□ -0.31
FREM3P0C091 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
FREM3P0C091 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FREM3P0C091 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.12□□□□□ -0.31
FREM3P0C091 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
FREM3P0C091 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FREM3P0C091 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.12□□□□□ -0.31
FREM3P0C091 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FREM3P0C091 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.12□□□□□ -0.31
FREM3P0C091 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.12□□□□□ -0.31
FREM3P0C091 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC13.12□□□□□ -0.31
FREM3P0C091 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.12□□□□□ -0.31
FREM3P0C091 AC100827.2-201ENST00000563214 1194 ntBASIC13.12□□□□□ -0.31
FREM3P0C091 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms