Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CAPN1P07384 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.37□□□□□ -0.11
CAPN1P07384 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN1P07384 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN1P07384 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN1P07384 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN1P07384 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CAPN1P07384 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN1P07384 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN1P07384 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN1P07384 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CAPN1P07384 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CAPN1P07384 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN1P07384 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CAPN1P07384 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
CAPN1P07384 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN1P07384 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN1P07384 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN1P07384 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.36□□□□□ -0.11
CAPN1P07384 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN1P07384 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN1P07384 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN1P07384 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN1P07384 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN1P07384 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN1P07384 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN1P07384 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CAPN1P07384 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN1P07384 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN1P07384 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.36□□□□□ -0.11
CAPN1P07384 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN1P07384 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.36□□□□□ -0.11
CAPN1P07384 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.36□□□□□ -0.11
CAPN1P07384 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.36□□□□□ -0.11
CAPN1P07384 C2orf69P2-201ENST00000562032 1123 ntBASIC14.36□□□□□ -0.11
CAPN1P07384 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN1P07384 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.36□□□□□ -0.11
CAPN1P07384 MIR4741-201ENST00000579822 90 ntBASIC14.36□□□□□ -0.11
CAPN1P07384 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.36□□□□□ -0.11
CAPN1P07384 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.36□□□□□ -0.11
CAPN1P07384 AC091271.1-201ENST00000611877 1162 ntBASIC14.36□□□□□ -0.11
CAPN1P07384 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.36□□□□□ -0.11
CAPN1P07384 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
CAPN1P07384 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.36□□□□□ -0.11
CAPN1P07384 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CAPN1P07384 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN1P07384 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN1P07384 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN1P07384 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN1P07384 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN1P07384 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN1P07384 AC215219.1-201ENST00000400706 1817 ntBASIC14.36□□□□□ -0.11
CAPN1P07384 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC14.36□□□□□ -0.11
CAPN1P07384 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
CAPN1P07384 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN1P07384 AC011840.2-201ENST00000563063 1520 ntBASIC14.36□□□□□ -0.11
CAPN1P07384 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
CAPN1P07384 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CAPN1P07384 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN1P07384 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.35□□□□□ -0.11
CAPN1P07384 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN1P07384 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.35□□□□□ -0.11
CAPN1P07384 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.35□□□□□ -0.11
CAPN1P07384 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN1P07384 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.35□□□□□ -0.11
CAPN1P07384 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.35□□□□□ -0.11
CAPN1P07384 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.35□□□□□ -0.11
CAPN1P07384 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN1P07384 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CAPN1P07384 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN1P07384 TPM3P8-201ENST00000330554 643 ntBASIC14.35□□□□□ -0.11
CAPN1P07384 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN1P07384 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CAPN1P07384 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CAPN1P07384 GCOM2-201ENST00000509133 1104 ntBASIC14.35□□□□□ -0.11
CAPN1P07384 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.35□□□□□ -0.11
CAPN1P07384 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.35□□□□□ -0.11
CAPN1P07384 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.35□□□□□ -0.11
CAPN1P07384 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.35□□□□□ -0.11
CAPN1P07384 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.35□□□□□ -0.11
CAPN1P07384 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.35□□□□□ -0.11
CAPN1P07384 AC244093.1-201ENST00000610837 814 ntBASIC14.35□□□□□ -0.11
CAPN1P07384 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.35□□□□□ -0.11
CAPN1P07384 ENPP7P14-201ENST00000621765 1040 ntBASIC14.35□□□□□ -0.11
CAPN1P07384 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN1P07384 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN1P07384 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CAPN1P07384 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN1P07384 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN1P07384 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CAPN1P07384 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CAPN1P07384 AC020910.5-201ENST00000623668 1865 ntBASIC14.35□□□□□ -0.11
CAPN1P07384 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN1P07384 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CAPN1P07384 CLUHP2-201ENST00000426660 1303 ntBASIC14.35□□□□□ -0.11
CAPN1P07384 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN1P07384 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CAPN1P07384 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN1P07384 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN1P07384 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms