Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6V0A4Q9HBG4 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.14■□□□□ 0.17
ATP6V0A4Q9HBG4 AC006335.1-201ENST00000445200 547 ntBASIC16.14■□□□□ 0.17
ATP6V0A4Q9HBG4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.14■□□□□ 0.17
ATP6V0A4Q9HBG4 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6V0A4Q9HBG4 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.14■□□□□ 0.17
ATP6V0A4Q9HBG4 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.14■□□□□ 0.17
ATP6V0A4Q9HBG4 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.14■□□□□ 0.17
ATP6V0A4Q9HBG4 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
ATP6V0A4Q9HBG4 AL353726.2-201ENST00000623259 884 ntBASIC16.14■□□□□ 0.17
ATP6V0A4Q9HBG4 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.14■□□□□ 0.17
ATP6V0A4Q9HBG4 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6V0A4Q9HBG4 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6V0A4Q9HBG4 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6V0A4Q9HBG4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6V0A4Q9HBG4 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6V0A4Q9HBG4 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6V0A4Q9HBG4 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ATP6V0A4Q9HBG4 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.14■□□□□ 0.17
ATP6V0A4Q9HBG4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6V0A4Q9HBG4 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6V0A4Q9HBG4 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ATP6V0A4Q9HBG4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6V0A4Q9HBG4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6V0A4Q9HBG4 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 LINC00552-201ENST00000625151 2579 ntBASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 RN7SKP214-201ENST00000364208 315 ntBASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 AC007274.2-201ENST00000421675 662 ntBASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 AC003686.1-201ENST00000550956 1034 ntBASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 AC005586.2-201ENST00000563946 837 ntBASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 AHCYP4-201ENST00000419201 1315 ntBASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP6V0A4Q9HBG4 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 XBP1P1-201ENST00000436573 652 ntBASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 ST13P19-201ENST00000442505 1124 ntBASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 TMEM198B-204ENST00000484016 896 ntBASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 AC090857.1-201ENST00000527400 390 ntBASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
ATP6V0A4Q9HBG4 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms