Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VPS33AQ96AX1 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.02□□□□□ -0.16
VPS33AQ96AX1 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS33AQ96AX1 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS33AQ96AX1 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS33AQ96AX1 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS33AQ96AX1 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS33AQ96AX1 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS33AQ96AX1 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS33AQ96AX1 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS33AQ96AX1 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS33AQ96AX1 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
VPS33AQ96AX1 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
VPS33AQ96AX1 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VPS33AQ96AX1 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
VPS33AQ96AX1 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS33AQ96AX1 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS33AQ96AX1 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
VPS33AQ96AX1 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
VPS33AQ96AX1 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VPS33AQ96AX1 MEX3B-202ENST00000558133 4333 ntBASIC14.02□□□□□ -0.16
VPS33AQ96AX1 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VPS33AQ96AX1 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS33AQ96AX1 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VPS33AQ96AX1 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
VPS33AQ96AX1 BASP1P1-201ENST00000430708 665 ntBASIC14.02□□□□□ -0.17
VPS33AQ96AX1 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.02□□□□□ -0.17
VPS33AQ96AX1 AC093214.1-201ENST00000511688 1107 ntBASIC14.02□□□□□ -0.17
VPS33AQ96AX1 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.02□□□□□ -0.17
VPS33AQ96AX1 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
VPS33AQ96AX1 AC138696.2-201ENST00000607376 223 ntBASIC14.02□□□□□ -0.17
VPS33AQ96AX1 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.02□□□□□ -0.17
VPS33AQ96AX1 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.02□□□□□ -0.17
VPS33AQ96AX1 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VPS33AQ96AX1 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
VPS33AQ96AX1 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
VPS33AQ96AX1 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
VPS33AQ96AX1 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
VPS33AQ96AX1 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VPS33AQ96AX1 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
VPS33AQ96AX1 AC020658.7-201ENST00000624274 2442 ntBASIC14.02□□□□□ -0.17
VPS33AQ96AX1 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
VPS33AQ96AX1 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VPS33AQ96AX1 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VPS33AQ96AX1 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
VPS33AQ96AX1 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.02□□□□□ -0.17
VPS33AQ96AX1 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VPS33AQ96AX1 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
VPS33AQ96AX1 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 MYCLP2-201ENST00000449268 967 ntBASIC14.01□□□□□ -0.17
VPS33AQ96AX1 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 AC133539.2-201ENST00000604757 467 ntBASIC14.01□□□□□ -0.17
VPS33AQ96AX1 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms