Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ASIC1P78348 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ASIC1P78348 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ASIC1P78348 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ASIC1P78348 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ASIC1P78348 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.23■□□□□ 0.19
ASIC1P78348 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ASIC1P78348 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ASIC1P78348 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ASIC1P78348 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ASIC1P78348 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ASIC1P78348 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ASIC1P78348 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.23■□□□□ 0.19
ASIC1P78348 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.23■□□□□ 0.19
ASIC1P78348 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ASIC1P78348 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ASIC1P78348 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.23■□□□□ 0.19
ASIC1P78348 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ASIC1P78348 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ASIC1P78348 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.23■□□□□ 0.19
ASIC1P78348 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.23■□□□□ 0.19
ASIC1P78348 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ASIC1P78348 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ASIC1P78348 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.23■□□□□ 0.19
ASIC1P78348 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
ASIC1P78348 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.23■□□□□ 0.19
ASIC1P78348 HILS1-202ENST00000545329 423 ntBASIC16.23■□□□□ 0.19
ASIC1P78348 DUX4L46-201ENST00000566845 751 ntBASIC16.23■□□□□ 0.19
ASIC1P78348 MIR6775-201ENST00000617557 69 ntBASIC16.23■□□□□ 0.19
ASIC1P78348 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ASIC1P78348 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ASIC1P78348 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ASIC1P78348 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.23■□□□□ 0.19
ASIC1P78348 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
ASIC1P78348 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ASIC1P78348 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ASIC1P78348 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC16.23■□□□□ 0.19
ASIC1P78348 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
ASIC1P78348 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC16.22■□□□□ 0.19
ASIC1P78348 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
ASIC1P78348 AL359881.3-201ENST00000602640 1721 ntBASIC16.22■□□□□ 0.19
ASIC1P78348 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ASIC1P78348 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ASIC1P78348 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ASIC1P78348 KRT8P24-201ENST00000560290 1559 ntBASIC16.22■□□□□ 0.19
ASIC1P78348 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
ASIC1P78348 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ASIC1P78348 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ASIC1P78348 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ASIC1P78348 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ASIC1P78348 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.22■□□□□ 0.19
ASIC1P78348 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.22■□□□□ 0.19
ASIC1P78348 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ASIC1P78348 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.22■□□□□ 0.19
ASIC1P78348 HLA-V-201ENST00000429037 534 ntBASIC16.22■□□□□ 0.19
ASIC1P78348 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.22■□□□□ 0.19
ASIC1P78348 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ASIC1P78348 GPR53P-205ENST00000457298 1084 ntBASIC16.22■□□□□ 0.19
ASIC1P78348 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.22■□□□□ 0.19
ASIC1P78348 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.22■□□□□ 0.19
ASIC1P78348 MIR4741-201ENST00000579822 90 ntBASIC16.22■□□□□ 0.19
ASIC1P78348 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.22■□□□□ 0.19
ASIC1P78348 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
ASIC1P78348 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC16.22■□□□□ 0.19
ASIC1P78348 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ASIC1P78348 TMBIM7P-202ENST00000641474 1516 ntBASIC16.22■□□□□ 0.19
ASIC1P78348 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ASIC1P78348 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
ASIC1P78348 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.22■□□□□ 0.19
ASIC1P78348 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
ASIC1P78348 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
ASIC1P78348 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.22■□□□□ 0.19
ASIC1P78348 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ASIC1P78348 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ASIC1P78348 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ASIC1P78348 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ASIC1P78348 TUBB8P4-201ENST00000511806 1324 ntBASIC16.21■□□□□ 0.19
ASIC1P78348 BEND3P1-201ENST00000421591 1944 ntBASIC16.21■□□□□ 0.19
ASIC1P78348 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ASIC1P78348 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC16.21■□□□□ 0.19
ASIC1P78348 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
ASIC1P78348 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
ASIC1P78348 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ASIC1P78348 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC16.21■□□□□ 0.19
ASIC1P78348 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ASIC1P78348 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ASIC1P78348 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ASIC1P78348 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ASIC1P78348 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ASIC1P78348 AC099336.1-201ENST00000417053 1171 ntBASIC16.21■□□□□ 0.19
ASIC1P78348 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.21■□□□□ 0.19
ASIC1P78348 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.21■□□□□ 0.19
ASIC1P78348 MIR6720-201ENST00000611664 98 ntBASIC16.21■□□□□ 0.19
ASIC1P78348 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ASIC1P78348 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ASIC1P78348 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ASIC1P78348 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.21■□□□□ 0.19
ASIC1P78348 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ASIC1P78348 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ASIC1P78348 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms