Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LMO4P61968 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LMO4P61968 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LMO4P61968 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LMO4P61968 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LMO4P61968 AC092638.2-201ENST00000441105 947 ntBASIC11.79□□□□□ -0.52
LMO4P61968 AC098934.1-203ENST00000442868 1262 ntBASIC11.79□□□□□ -0.52
LMO4P61968 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC11.79□□□□□ -0.52
LMO4P61968 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC11.79□□□□□ -0.52
LMO4P61968 AC018463.1-201ENST00000456674 917 ntBASIC11.79□□□□□ -0.52
LMO4P61968 AC005740.1-201ENST00000515639 522 ntBASIC11.79□□□□□ -0.52
LMO4P61968 RNA5SP417-201ENST00000516459 108 ntBASIC11.79□□□□□ -0.52
LMO4P61968 AP003398.1-201ENST00000531124 318 ntBASIC11.79□□□□□ -0.52
LMO4P61968 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC11.79□□□□□ -0.52
LMO4P61968 NEU3-207ENST00000534628 746 ntTSL 2 BASIC11.79□□□□□ -0.52
LMO4P61968 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC11.79□□□□□ -0.52
LMO4P61968 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC11.79□□□□□ -0.52
LMO4P61968 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
LMO4P61968 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC11.79□□□□□ -0.52
LMO4P61968 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC11.79□□□□□ -0.52
LMO4P61968 AP000322.3-201ENST00000608665 388 ntBASIC11.79□□□□□ -0.52
LMO4P61968 AC073911.3-201ENST00000624401 631 ntBASIC11.79□□□□□ -0.52
LMO4P61968 AL161773.1-201ENST00000624845 863 ntBASIC11.79□□□□□ -0.52
LMO4P61968 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
LMO4P61968 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LMO4P61968 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LMO4P61968 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
LMO4P61968 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC11.79□□□□□ -0.52
LMO4P61968 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC11.79□□□□□ -0.52
LMO4P61968 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC11.79□□□□□ -0.52
LMO4P61968 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LMO4P61968 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC11.79□□□□□ -0.52
LMO4P61968 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LMO4P61968 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LMO4P61968 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LMO4P61968 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LMO4P61968 FTX-216ENST00000638985 1367 ntTSL 5 BASIC11.79□□□□□ -0.52
LMO4P61968 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC11.79□□□□□ -0.52
LMO4P61968 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LMO4P61968 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC11.79□□□□□ -0.52
LMO4P61968 AC232323.1-201ENST00000540724 2099 ntBASIC11.79□□□□□ -0.52
LMO4P61968 FLJ16779-201ENST00000612722 7638 ntBASIC11.79□□□□□ -0.52
LMO4P61968 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
LMO4P61968 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LMO4P61968 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LMO4P61968 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LMO4P61968 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LMO4P61968 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC11.78□□□□□ -0.52
LMO4P61968 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
LMO4P61968 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
LMO4P61968 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LMO4P61968 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LMO4P61968 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LMO4P61968 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
LMO4P61968 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LMO4P61968 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LMO4P61968 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC11.78□□□□□ -0.52
LMO4P61968 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC11.78□□□□□ -0.52
LMO4P61968 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LMO4P61968 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LMO4P61968 BX679664.3-201ENST00000414070 555 ntBASIC11.78□□□□□ -0.52
LMO4P61968 PPP1R2P4-201ENST00000424051 595 ntBASIC11.78□□□□□ -0.52
LMO4P61968 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC11.78□□□□□ -0.52
LMO4P61968 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC11.78□□□□□ -0.52
LMO4P61968 LYPLA2P1-203ENST00000447689 696 ntBASIC11.78□□□□□ -0.52
LMO4P61968 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC11.78□□□□□ -0.52
LMO4P61968 AC113935.1-201ENST00000471722 555 ntBASIC11.78□□□□□ -0.52
LMO4P61968 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LMO4P61968 IGHV3-37-201ENST00000518544 340 ntBASIC11.78□□□□□ -0.52
LMO4P61968 OR5BD1P-201ENST00000532527 817 ntBASIC11.78□□□□□ -0.52
LMO4P61968 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC11.78□□□□□ -0.52
LMO4P61968 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC11.78□□□□□ -0.52
LMO4P61968 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC11.78□□□□□ -0.52
LMO4P61968 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC11.78□□□□□ -0.52
LMO4P61968 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC11.78□□□□□ -0.52
LMO4P61968 AC005041.3-201ENST00000606287 649 ntBASIC11.78□□□□□ -0.52
LMO4P61968 AC007250.1-201ENST00000608934 338 ntBASIC11.78□□□□□ -0.52
LMO4P61968 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
LMO4P61968 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LMO4P61968 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LMO4P61968 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LMO4P61968 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC11.78□□□□□ -0.52
LMO4P61968 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
LMO4P61968 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LMO4P61968 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LMO4P61968 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
LMO4P61968 FES-203ENST00000394302 2133 ntTSL 5 BASIC11.78□□□□□ -0.52
LMO4P61968 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LMO4P61968 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC11.78□□□□□ -0.52
LMO4P61968 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LMO4P61968 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
LMO4P61968 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
LMO4P61968 CICP24-201ENST00000605464 2705 ntBASIC11.78□□□□□ -0.52
LMO4P61968 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LMO4P61968 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LMO4P61968 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC11.78□□□□□ -0.52
LMO4P61968 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
LMO4P61968 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
LMO4P61968 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LMO4P61968 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms