Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH13P55290 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.24□□□□□ -0.13
CDH13P55290 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH13P55290 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH13P55290 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.24□□□□□ -0.13
CDH13P55290 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
CDH13P55290 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH13P55290 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH13P55290 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CDH13P55290 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CDH13P55290 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH13P55290 ARSEP1-201ENST00000420443 635 ntBASIC14.24□□□□□ -0.13
CDH13P55290 BCRP2-202ENST00000447763 634 ntBASIC14.24□□□□□ -0.13
CDH13P55290 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.24□□□□□ -0.13
CDH13P55290 AC011495.1-201ENST00000498085 584 ntBASIC14.24□□□□□ -0.13
CDH13P55290 BCRP6-201ENST00000510112 632 ntBASIC14.24□□□□□ -0.13
CDH13P55290 BCRP7-201ENST00000511549 544 ntBASIC14.24□□□□□ -0.13
CDH13P55290 RNA5SP486-201ENST00000515961 83 ntBASIC14.24□□□□□ -0.13
CDH13P55290 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.24□□□□□ -0.13
CDH13P55290 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.24□□□□□ -0.13
CDH13P55290 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.24□□□□□ -0.13
CDH13P55290 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.24□□□□□ -0.13
CDH13P55290 AC002472.3-201ENST00000640124 621 ntBASIC14.24□□□□□ -0.13
CDH13P55290 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.24□□□□□ -0.13
CDH13P55290 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH13P55290 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH13P55290 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH13P55290 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH13P55290 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH13P55290 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CDH13P55290 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH13P55290 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH13P55290 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH13P55290 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH13P55290 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH13P55290 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH13P55290 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.23□□□□□ -0.13
CDH13P55290 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH13P55290 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH13P55290 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.23□□□□□ -0.13
CDH13P55290 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH13P55290 AL365181.3-201ENST00000605886 3222 ntBASIC14.23□□□□□ -0.13
CDH13P55290 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH13P55290 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CDH13P55290 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CDH13P55290 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH13P55290 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CDH13P55290 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH13P55290 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH13P55290 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH13P55290 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH13P55290 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH13P55290 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH13P55290 AC092933.1-201ENST00000393644 945 ntBASIC14.23□□□□□ -0.13
CDH13P55290 FAM8A4P-201ENST00000435433 1213 ntBASIC14.23□□□□□ -0.13
CDH13P55290 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.23□□□□□ -0.13
CDH13P55290 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.23□□□□□ -0.13
CDH13P55290 RN7SL752P-201ENST00000463779 287 ntBASIC14.23□□□□□ -0.13
CDH13P55290 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.23□□□□□ -0.13
CDH13P55290 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.23□□□□□ -0.13
CDH13P55290 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.23□□□□□ -0.13
CDH13P55290 SLC25A47P1-201ENST00000531577 414 ntBASIC14.23□□□□□ -0.13
CDH13P55290 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.23□□□□□ -0.13
CDH13P55290 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CDH13P55290 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CDH13P55290 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.23□□□□□ -0.13
CDH13P55290 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH13P55290 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CDH13P55290 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CDH13P55290 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH13P55290 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH13P55290 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH13P55290 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CDH13P55290 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH13P55290 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CDH13P55290 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH13P55290 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.23□□□□□ -0.13
CDH13P55290 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH13P55290 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CDH13P55290 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH13P55290 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH13P55290 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH13P55290 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
CDH13P55290 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.22□□□□□ -0.13
CDH13P55290 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDH13P55290 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDH13P55290 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH13P55290 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH13P55290 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDH13P55290 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CDH13P55290 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.22□□□□□ -0.13
CDH13P55290 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.22□□□□□ -0.13
CDH13P55290 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CDH13P55290 AC072061.1-201ENST00000569710 2234 ntBASIC14.22□□□□□ -0.13
CDH13P55290 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDH13P55290 AC064801.2-201ENST00000625052 1303 ntBASIC14.22□□□□□ -0.13
CDH13P55290 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.22□□□□□ -0.13
CDH13P55290 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH13P55290 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
CDH13P55290 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms