Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
RTCBQ9Y3I0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
RTCBQ9Y3I0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC29.02■■■□□ 2.24
RTCBQ9Y3I0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
RTCBQ9Y3I0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC29.01■■■□□ 2.24
RTCBQ9Y3I0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC29.01■■■□□ 2.24
RTCBQ9Y3I0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC29.01■■■□□ 2.23
RTCBQ9Y3I0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
RTCBQ9Y3I0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC29.01■■■□□ 2.23
RTCBQ9Y3I0 AL358852.1-201ENST00000623174 1268 ntBASIC29.01■■■□□ 2.23
RTCBQ9Y3I0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC29.01■■■□□ 2.23
RTCBQ9Y3I0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
RTCBQ9Y3I0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
RTCBQ9Y3I0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC29■■■□□ 2.23
RTCBQ9Y3I0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC29■■■□□ 2.23
RTCBQ9Y3I0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC29■■■□□ 2.23
RTCBQ9Y3I0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC29■■■□□ 2.23
RTCBQ9Y3I0 AC027612.3-201ENST00000413684 1047 ntBASIC29■■■□□ 2.23
RTCBQ9Y3I0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC29■■■□□ 2.23
RTCBQ9Y3I0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC29■■■□□ 2.23
RTCBQ9Y3I0 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
RTCBQ9Y3I0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC28.99■■■□□ 2.23
RTCBQ9Y3I0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC28.99■■■□□ 2.23
RTCBQ9Y3I0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
RTCBQ9Y3I0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
RTCBQ9Y3I0 AC123595.1-201ENST00000440769 1046 ntBASIC28.99■■■□□ 2.23
RTCBQ9Y3I0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC28.99■■■□□ 2.23
RTCBQ9Y3I0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC28.99■■■□□ 2.23
RTCBQ9Y3I0 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC28.98■■■□□ 2.23
RTCBQ9Y3I0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
RTCBQ9Y3I0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
RTCBQ9Y3I0 AC004911.1-201ENST00000416316 871 ntBASIC28.98■■■□□ 2.23
RTCBQ9Y3I0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
RTCBQ9Y3I0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
RTCBQ9Y3I0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
RTCBQ9Y3I0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
RTCBQ9Y3I0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
RTCBQ9Y3I0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
RTCBQ9Y3I0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC28.97■■■□□ 2.23
RTCBQ9Y3I0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC28.97■■■□□ 2.23
RTCBQ9Y3I0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC28.97■■■□□ 2.23
RTCBQ9Y3I0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC28.97■■■□□ 2.23
RTCBQ9Y3I0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC28.97■■■□□ 2.23
RTCBQ9Y3I0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC28.97■■■□□ 2.23
RTCBQ9Y3I0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC28.96■■■□□ 2.23
RTCBQ9Y3I0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC28.96■■■□□ 2.23
RTCBQ9Y3I0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC28.96■■■□□ 2.23
RTCBQ9Y3I0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC28.96■■■□□ 2.23
RTCBQ9Y3I0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC28.96■■■□□ 2.23
RTCBQ9Y3I0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
RTCBQ9Y3I0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC28.96■■■□□ 2.23
RTCBQ9Y3I0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
RTCBQ9Y3I0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC28.95■■■□□ 2.22
RTCBQ9Y3I0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC28.95■■■□□ 2.22
RTCBQ9Y3I0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
RTCBQ9Y3I0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC28.94■■■□□ 2.22
RTCBQ9Y3I0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC28.94■■■□□ 2.22
RTCBQ9Y3I0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
RTCBQ9Y3I0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
RTCBQ9Y3I0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC28.94■■■□□ 2.22
RTCBQ9Y3I0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC28.94■■■□□ 2.22
RTCBQ9Y3I0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC28.94■■■□□ 2.22
RTCBQ9Y3I0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC28.94■■■□□ 2.22
RTCBQ9Y3I0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC28.94■■■□□ 2.22
RTCBQ9Y3I0 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
RTCBQ9Y3I0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
RTCBQ9Y3I0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
RTCBQ9Y3I0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC28.93■■■□□ 2.22
RTCBQ9Y3I0 IGHV3-19-201ENST00000521488 291 ntBASIC28.93■■■□□ 2.22
RTCBQ9Y3I0 MIR6084-201ENST00000622012 110 ntBASIC28.93■■■□□ 2.22
RTCBQ9Y3I0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC28.93■■■□□ 2.22
RTCBQ9Y3I0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
RTCBQ9Y3I0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
RTCBQ9Y3I0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC28.93■■■□□ 2.22
RTCBQ9Y3I0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC28.92■■■□□ 2.22
RTCBQ9Y3I0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC28.92■■■□□ 2.22
RTCBQ9Y3I0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC28.92■■■□□ 2.22
RTCBQ9Y3I0 MIR572-201ENST00000384983 95 ntBASIC28.92■■■□□ 2.22
RTCBQ9Y3I0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
RTCBQ9Y3I0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC28.92■■■□□ 2.22
RTCBQ9Y3I0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC28.92■■■□□ 2.22
RTCBQ9Y3I0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
RTCBQ9Y3I0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
RTCBQ9Y3I0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
RTCBQ9Y3I0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC28.91■■■□□ 2.22
RTCBQ9Y3I0 ID1-201ENST00000376105 1233 ntBASIC28.91■■■□□ 2.22
RTCBQ9Y3I0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC28.91■■■□□ 2.22
RTCBQ9Y3I0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC28.91■■■□□ 2.22
RTCBQ9Y3I0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC28.91■■■□□ 2.22
RTCBQ9Y3I0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC28.91■■■□□ 2.22
RTCBQ9Y3I0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
RTCBQ9Y3I0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC28.9■■■□□ 2.22
RTCBQ9Y3I0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC28.9■■■□□ 2.22
RTCBQ9Y3I0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
RTCBQ9Y3I0 AC012414.1-201ENST00000556676 535 ntBASIC28.9■■■□□ 2.22
RTCBQ9Y3I0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC28.9■■■□□ 2.22
RTCBQ9Y3I0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC28.9■■■□□ 2.22
RTCBQ9Y3I0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC28.89■■■□□ 2.22
RTCBQ9Y3I0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
RTCBQ9Y3I0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC28.89■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms