Protein–RNA interactions for Protein: Q9QUK6

Tlr4, Toll-like receptor 4, mousemouse

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr4Q9QUK6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.96■□□□□ 0.79
Tlr4Q9QUK6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
Tlr4Q9QUK6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tlr4Q9QUK6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tlr4Q9QUK6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tlr4Q9QUK6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.95■□□□□ 0.78
Tlr4Q9QUK6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Tlr4Q9QUK6 Serp2-204ENSMUST00000228055 705 ntBASIC19.95■□□□□ 0.78
Tlr4Q9QUK6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Tlr4Q9QUK6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Tlr4Q9QUK6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tlr4Q9QUK6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Tlr4Q9QUK6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Tlr4Q9QUK6 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.95■□□□□ 0.78
Tlr4Q9QUK6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tlr4Q9QUK6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Tlr4Q9QUK6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tlr4Q9QUK6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tlr4Q9QUK6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.94■□□□□ 0.78
Tlr4Q9QUK6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tlr4Q9QUK6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tlr4Q9QUK6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tlr4Q9QUK6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tlr4Q9QUK6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tlr4Q9QUK6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tlr4Q9QUK6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tlr4Q9QUK6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tlr4Q9QUK6 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Tlr4Q9QUK6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tlr4Q9QUK6 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.93■□□□□ 0.78
Tlr4Q9QUK6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tlr4Q9QUK6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tlr4Q9QUK6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tlr4Q9QUK6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tlr4Q9QUK6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tlr4Q9QUK6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tlr4Q9QUK6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tlr4Q9QUK6 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tlr4Q9QUK6 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tlr4Q9QUK6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tlr4Q9QUK6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tlr4Q9QUK6 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Tlr4Q9QUK6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tlr4Q9QUK6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Tlr4Q9QUK6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Tlr4Q9QUK6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Tlr4Q9QUK6 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.92■□□□□ 0.78
Tlr4Q9QUK6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tlr4Q9QUK6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
Tlr4Q9QUK6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tlr4Q9QUK6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tlr4Q9QUK6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tlr4Q9QUK6 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.91■□□□□ 0.78
Tlr4Q9QUK6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.91■□□□□ 0.78
Tlr4Q9QUK6 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tlr4Q9QUK6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tlr4Q9QUK6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
Tlr4Q9QUK6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tlr4Q9QUK6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.91■□□□□ 0.78
Tlr4Q9QUK6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tlr4Q9QUK6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Tlr4Q9QUK6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Tlr4Q9QUK6 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.9■□□□□ 0.78
Tlr4Q9QUK6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Tlr4Q9QUK6 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Tlr4Q9QUK6 Gm43137-201ENSMUST00000198052 594 ntBASIC19.9■□□□□ 0.78
Tlr4Q9QUK6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.89■□□□□ 0.77
Tlr4Q9QUK6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tlr4Q9QUK6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.89■□□□□ 0.77
Tlr4Q9QUK6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tlr4Q9QUK6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tlr4Q9QUK6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.89■□□□□ 0.77
Tlr4Q9QUK6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Tlr4Q9QUK6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Tlr4Q9QUK6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tlr4Q9QUK6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tlr4Q9QUK6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tlr4Q9QUK6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tlr4Q9QUK6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tlr4Q9QUK6 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Tlr4Q9QUK6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tlr4Q9QUK6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tlr4Q9QUK6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tlr4Q9QUK6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.88■□□□□ 0.77
Tlr4Q9QUK6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tlr4Q9QUK6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Tlr4Q9QUK6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tlr4Q9QUK6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tlr4Q9QUK6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tlr4Q9QUK6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.86■□□□□ 0.77
Tlr4Q9QUK6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Tlr4Q9QUK6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tlr4Q9QUK6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tlr4Q9QUK6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tlr4Q9QUK6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tlr4Q9QUK6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tlr4Q9QUK6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tlr4Q9QUK6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tlr4Q9QUK6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Tlr4Q9QUK6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms