Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Chd1lQ9CXF7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC23■■□□□ 1.27
Chd1lQ9CXF7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Chd1lQ9CXF7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Chd1lQ9CXF7 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Chd1lQ9CXF7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Chd1lQ9CXF7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Chd1lQ9CXF7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Chd1lQ9CXF7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Chd1lQ9CXF7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Chd1lQ9CXF7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Chd1lQ9CXF7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.99■■□□□ 1.27
Chd1lQ9CXF7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Chd1lQ9CXF7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Chd1lQ9CXF7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Chd1lQ9CXF7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Chd1lQ9CXF7 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Chd1lQ9CXF7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Chd1lQ9CXF7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC22.98■■□□□ 1.27
Chd1lQ9CXF7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC22.98■■□□□ 1.27
Chd1lQ9CXF7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Chd1lQ9CXF7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Chd1lQ9CXF7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Chd1lQ9CXF7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Chd1lQ9CXF7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Chd1lQ9CXF7 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.97■■□□□ 1.27
Chd1lQ9CXF7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Chd1lQ9CXF7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC22.97■■□□□ 1.27
Chd1lQ9CXF7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Chd1lQ9CXF7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Chd1lQ9CXF7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Chd1lQ9CXF7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Chd1lQ9CXF7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Chd1lQ9CXF7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
Chd1lQ9CXF7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.96■■□□□ 1.27
Chd1lQ9CXF7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Chd1lQ9CXF7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Chd1lQ9CXF7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Chd1lQ9CXF7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.95■■□□□ 1.26
Chd1lQ9CXF7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Chd1lQ9CXF7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Chd1lQ9CXF7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
Chd1lQ9CXF7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC22.95■■□□□ 1.26
Chd1lQ9CXF7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Chd1lQ9CXF7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Chd1lQ9CXF7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Chd1lQ9CXF7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC22.94■■□□□ 1.26
Chd1lQ9CXF7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Chd1lQ9CXF7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Chd1lQ9CXF7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Chd1lQ9CXF7 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.94■■□□□ 1.26
Chd1lQ9CXF7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Chd1lQ9CXF7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Chd1lQ9CXF7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Chd1lQ9CXF7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Chd1lQ9CXF7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Chd1lQ9CXF7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
Chd1lQ9CXF7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Chd1lQ9CXF7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Chd1lQ9CXF7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Chd1lQ9CXF7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Chd1lQ9CXF7 Gm11687-201ENSMUST00000118911 886 ntBASIC22.93■■□□□ 1.26
Chd1lQ9CXF7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Chd1lQ9CXF7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Chd1lQ9CXF7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Chd1lQ9CXF7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Chd1lQ9CXF7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Chd1lQ9CXF7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Chd1lQ9CXF7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Chd1lQ9CXF7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Chd1lQ9CXF7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Chd1lQ9CXF7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC22.92■■□□□ 1.26
Chd1lQ9CXF7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
Chd1lQ9CXF7 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Chd1lQ9CXF7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
Chd1lQ9CXF7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Chd1lQ9CXF7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Chd1lQ9CXF7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Chd1lQ9CXF7 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.9■■□□□ 1.26
Chd1lQ9CXF7 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Chd1lQ9CXF7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Chd1lQ9CXF7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Chd1lQ9CXF7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Chd1lQ9CXF7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Chd1lQ9CXF7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Chd1lQ9CXF7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Chd1lQ9CXF7 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Chd1lQ9CXF7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Chd1lQ9CXF7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Chd1lQ9CXF7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Chd1lQ9CXF7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Chd1lQ9CXF7 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Chd1lQ9CXF7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Chd1lQ9CXF7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Chd1lQ9CXF7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.88■■□□□ 1.25
Chd1lQ9CXF7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Chd1lQ9CXF7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Chd1lQ9CXF7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Chd1lQ9CXF7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Chd1lQ9CXF7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms