Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cystm1Q8K353 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cystm1Q8K353 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cystm1Q8K353 Gm10420-201ENSMUST00000121713 882 ntBASIC12.68□□□□□ -0.38
Cystm1Q8K353 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC12.68□□□□□ -0.38
Cystm1Q8K353 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cystm1Q8K353 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cystm1Q8K353 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cystm1Q8K353 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.68□□□□□ -0.38
Cystm1Q8K353 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cystm1Q8K353 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Cystm1Q8K353 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cystm1Q8K353 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cystm1Q8K353 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cystm1Q8K353 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cystm1Q8K353 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cystm1Q8K353 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cystm1Q8K353 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cystm1Q8K353 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cystm1Q8K353 Gm5067-201ENSMUST00000170449 1009 ntBASIC12.67□□□□□ -0.38
Cystm1Q8K353 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC12.67□□□□□ -0.38
Cystm1Q8K353 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC12.67□□□□□ -0.38
Cystm1Q8K353 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC12.67□□□□□ -0.38
Cystm1Q8K353 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC12.67□□□□□ -0.38
Cystm1Q8K353 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC12.67□□□□□ -0.38
Cystm1Q8K353 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cystm1Q8K353 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cystm1Q8K353 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cystm1Q8K353 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cystm1Q8K353 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cystm1Q8K353 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cystm1Q8K353 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cystm1Q8K353 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cystm1Q8K353 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cystm1Q8K353 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cystm1Q8K353 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cystm1Q8K353 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cystm1Q8K353 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cystm1Q8K353 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cystm1Q8K353 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cystm1Q8K353 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cystm1Q8K353 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cystm1Q8K353 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Cystm1Q8K353 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cystm1Q8K353 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cystm1Q8K353 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cystm1Q8K353 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cystm1Q8K353 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cystm1Q8K353 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cystm1Q8K353 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cystm1Q8K353 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cystm1Q8K353 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cystm1Q8K353 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cystm1Q8K353 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cystm1Q8K353 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cystm1Q8K353 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cystm1Q8K353 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cystm1Q8K353 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cystm1Q8K353 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cystm1Q8K353 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cystm1Q8K353 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
Cystm1Q8K353 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cystm1Q8K353 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cystm1Q8K353 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC12.64□□□□□ -0.39
Cystm1Q8K353 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cystm1Q8K353 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cystm1Q8K353 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cystm1Q8K353 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cystm1Q8K353 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cystm1Q8K353 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cystm1Q8K353 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cystm1Q8K353 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cystm1Q8K353 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cystm1Q8K353 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cystm1Q8K353 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC12.64□□□□□ -0.39
Cystm1Q8K353 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cystm1Q8K353 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cystm1Q8K353 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cystm1Q8K353 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cystm1Q8K353 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cystm1Q8K353 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cystm1Q8K353 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cystm1Q8K353 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC12.63□□□□□ -0.39
Cystm1Q8K353 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC12.63□□□□□ -0.39
Cystm1Q8K353 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC12.63□□□□□ -0.39
Cystm1Q8K353 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC12.63□□□□□ -0.39
Cystm1Q8K353 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cystm1Q8K353 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cystm1Q8K353 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cystm1Q8K353 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cystm1Q8K353 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cystm1Q8K353 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cystm1Q8K353 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC12.63□□□□□ -0.39
Cystm1Q8K353 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC12.63□□□□□ -0.39
Cystm1Q8K353 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC12.63□□□□□ -0.39
Cystm1Q8K353 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cystm1Q8K353 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cystm1Q8K353 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cystm1Q8K353 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cystm1Q8K353 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms