Protein–RNA interactions for Protein: Q80XJ2

Rnf168, E3 ubiquitin-protein ligase RNF168, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf168Q80XJ2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf168Q80XJ2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf168Q80XJ2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf168Q80XJ2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf168Q80XJ2 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.62■■□□□ 1.05
Rnf168Q80XJ2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf168Q80XJ2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf168Q80XJ2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Rnf168Q80XJ2 Mir7075-201ENSMUST00000184187 82 ntBASIC21.62■■□□□ 1.05
Rnf168Q80XJ2 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.62■■□□□ 1.05
Rnf168Q80XJ2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf168Q80XJ2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf168Q80XJ2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.62■■□□□ 1.05
Rnf168Q80XJ2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Rnf168Q80XJ2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf168Q80XJ2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf168Q80XJ2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf168Q80XJ2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Rnf168Q80XJ2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.61■■□□□ 1.05
Rnf168Q80XJ2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
Rnf168Q80XJ2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf168Q80XJ2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf168Q80XJ2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf168Q80XJ2 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.61■■□□□ 1.05
Rnf168Q80XJ2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf168Q80XJ2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf168Q80XJ2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf168Q80XJ2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf168Q80XJ2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf168Q80XJ2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.6■■□□□ 1.05
Rnf168Q80XJ2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.6■■□□□ 1.05
Rnf168Q80XJ2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf168Q80XJ2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf168Q80XJ2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf168Q80XJ2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Rnf168Q80XJ2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf168Q80XJ2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.59■■□□□ 1.05
Rnf168Q80XJ2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf168Q80XJ2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf168Q80XJ2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf168Q80XJ2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf168Q80XJ2 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.59■■□□□ 1.05
Rnf168Q80XJ2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf168Q80XJ2 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
Rnf168Q80XJ2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf168Q80XJ2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.59■■□□□ 1.05
Rnf168Q80XJ2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.59■■□□□ 1.05
Rnf168Q80XJ2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf168Q80XJ2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Rnf168Q80XJ2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf168Q80XJ2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf168Q80XJ2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Rnf168Q80XJ2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf168Q80XJ2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Rnf168Q80XJ2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Rnf168Q80XJ2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf168Q80XJ2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf168Q80XJ2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Rnf168Q80XJ2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf168Q80XJ2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf168Q80XJ2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf168Q80XJ2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf168Q80XJ2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Rnf168Q80XJ2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.57■■□□□ 1.04
Rnf168Q80XJ2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.57■■□□□ 1.04
Rnf168Q80XJ2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf168Q80XJ2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf168Q80XJ2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf168Q80XJ2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.56■■□□□ 1.04
Rnf168Q80XJ2 Gm8495-201ENSMUST00000188740 694 ntBASIC21.56■■□□□ 1.04
Rnf168Q80XJ2 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.56■■□□□ 1.04
Rnf168Q80XJ2 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.56■■□□□ 1.04
Rnf168Q80XJ2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf168Q80XJ2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf168Q80XJ2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf168Q80XJ2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf168Q80XJ2 Gm18284-201ENSMUST00000172604 624 ntBASIC21.55■■□□□ 1.04
Rnf168Q80XJ2 Gm8493-201ENSMUST00000196881 489 ntBASIC21.55■■□□□ 1.04
Rnf168Q80XJ2 Gm43017-201ENSMUST00000198296 752 ntBASIC21.55■■□□□ 1.04
Rnf168Q80XJ2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.55■■□□□ 1.04
Rnf168Q80XJ2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf168Q80XJ2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.55■■□□□ 1.04
Rnf168Q80XJ2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Rnf168Q80XJ2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Rnf168Q80XJ2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.55■■□□□ 1.04
Rnf168Q80XJ2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.55■■□□□ 1.04
Rnf168Q80XJ2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf168Q80XJ2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf168Q80XJ2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf168Q80XJ2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf168Q80XJ2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
Rnf168Q80XJ2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf168Q80XJ2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf168Q80XJ2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf168Q80XJ2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf168Q80XJ2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.52■■□□□ 1.04
Rnf168Q80XJ2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf168Q80XJ2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Rnf168Q80XJ2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf168Q80XJ2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms