Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
RGPD4Q7Z3J3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
RGPD4Q7Z3J3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC29.41■■■□□ 2.3
RGPD4Q7Z3J3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC29.41■■■□□ 2.3
RGPD4Q7Z3J3 TMEM191A-211ENST00000637163 1067 ntBASIC29.41■■■□□ 2.3
RGPD4Q7Z3J3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC29.41■■■□□ 2.3
RGPD4Q7Z3J3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
RGPD4Q7Z3J3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
RGPD4Q7Z3J3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
RGPD4Q7Z3J3 NT5C3AP1-201ENST00000394500 1012 ntBASIC29.41■■■□□ 2.3
RGPD4Q7Z3J3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC29.41■■■□□ 2.3
RGPD4Q7Z3J3 pRNA.6-201ENST00000610482 90 ntBASIC29.41■■■□□ 2.3
RGPD4Q7Z3J3 pRNA.5-201ENST00000612139 90 ntBASIC29.41■■■□□ 2.3
RGPD4Q7Z3J3 pRNA.11-201ENST00000618423 90 ntBASIC29.41■■■□□ 2.3
RGPD4Q7Z3J3 pRNA.13-201ENST00000619112 90 ntBASIC29.41■■■□□ 2.3
RGPD4Q7Z3J3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC29.41■■■□□ 2.3
RGPD4Q7Z3J3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
RGPD4Q7Z3J3 AC137761.2-201ENST00000561729 223 ntBASIC29.4■■■□□ 2.3
RGPD4Q7Z3J3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC29.4■■■□□ 2.3
RGPD4Q7Z3J3 AC145350.3-201ENST00000569033 163 ntBASIC29.4■■■□□ 2.3
RGPD4Q7Z3J3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC29.4■■■□□ 2.3
RGPD4Q7Z3J3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC29.4■■■□□ 2.3
RGPD4Q7Z3J3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC29.4■■■□□ 2.3
RGPD4Q7Z3J3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
RGPD4Q7Z3J3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RGPD4Q7Z3J3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC29.39■■■□□ 2.3
RGPD4Q7Z3J3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC29.39■■■□□ 2.3
RGPD4Q7Z3J3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
RGPD4Q7Z3J3 LINC02228-203ENST00000641970 1355 ntBASIC29.39■■■□□ 2.29
RGPD4Q7Z3J3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
RGPD4Q7Z3J3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
RGPD4Q7Z3J3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
RGPD4Q7Z3J3 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
RGPD4Q7Z3J3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
RGPD4Q7Z3J3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC29.38■■■□□ 2.29
RGPD4Q7Z3J3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
RGPD4Q7Z3J3 MIR663A-201ENST00000385250 93 ntBASIC29.38■■■□□ 2.29
RGPD4Q7Z3J3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC29.38■■■□□ 2.29
RGPD4Q7Z3J3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
RGPD4Q7Z3J3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC29.37■■■□□ 2.29
RGPD4Q7Z3J3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RGPD4Q7Z3J3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
RGPD4Q7Z3J3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC29.37■■■□□ 2.29
RGPD4Q7Z3J3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC29.37■■■□□ 2.29
RGPD4Q7Z3J3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
RGPD4Q7Z3J3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
RGPD4Q7Z3J3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC29.36■■■□□ 2.29
RGPD4Q7Z3J3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
RGPD4Q7Z3J3 CROCCP5-201ENST00000436658 830 ntBASIC29.36■■■□□ 2.29
RGPD4Q7Z3J3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC29.36■■■□□ 2.29
RGPD4Q7Z3J3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC29.36■■■□□ 2.29
RGPD4Q7Z3J3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
RGPD4Q7Z3J3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC29.36■■■□□ 2.29
RGPD4Q7Z3J3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC29.36■■■□□ 2.29
RGPD4Q7Z3J3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
RGPD4Q7Z3J3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
RGPD4Q7Z3J3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
RGPD4Q7Z3J3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC29.36■■■□□ 2.29
RGPD4Q7Z3J3 AL109923.1-201ENST00000618799 583 ntBASIC29.36■■■□□ 2.29
RGPD4Q7Z3J3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC29.36■■■□□ 2.29
RGPD4Q7Z3J3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC29.36■■■□□ 2.29
RGPD4Q7Z3J3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC29.35■■■□□ 2.29
RGPD4Q7Z3J3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC29.35■■■□□ 2.29
RGPD4Q7Z3J3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC29.35■■■□□ 2.29
RGPD4Q7Z3J3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RGPD4Q7Z3J3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RGPD4Q7Z3J3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC29.35■■■□□ 2.29
RGPD4Q7Z3J3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC29.35■■■□□ 2.29
RGPD4Q7Z3J3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC29.35■■■□□ 2.29
RGPD4Q7Z3J3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RGPD4Q7Z3J3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC29.35■■■□□ 2.29
RGPD4Q7Z3J3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
RGPD4Q7Z3J3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC29.34■■■□□ 2.29
RGPD4Q7Z3J3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC29.34■■■□□ 2.29
RGPD4Q7Z3J3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC29.34■■■□□ 2.29
RGPD4Q7Z3J3 AL499627.2-201ENST00000606283 725 ntBASIC29.34■■■□□ 2.29
RGPD4Q7Z3J3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
RGPD4Q7Z3J3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC29.34■■■□□ 2.29
RGPD4Q7Z3J3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
RGPD4Q7Z3J3 MAP2K4P1-201ENST00000438453 1195 ntBASIC29.34■■■□□ 2.29
RGPD4Q7Z3J3 DBI-210ENST00000542275 757 ntTSL 5 BASIC29.34■■■□□ 2.29
RGPD4Q7Z3J3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RGPD4Q7Z3J3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC29.33■■■□□ 2.29
RGPD4Q7Z3J3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
RGPD4Q7Z3J3 NCF1B-203ENST00000435988 1254 ntBASIC29.33■■■□□ 2.29
RGPD4Q7Z3J3 AC006970.2-201ENST00000450065 779 ntBASIC29.33■■■□□ 2.29
RGPD4Q7Z3J3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC29.33■■■□□ 2.29
RGPD4Q7Z3J3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
RGPD4Q7Z3J3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
RGPD4Q7Z3J3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC29.32■■■□□ 2.28
RGPD4Q7Z3J3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC29.32■■■□□ 2.28
RGPD4Q7Z3J3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
RGPD4Q7Z3J3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
RGPD4Q7Z3J3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
RGPD4Q7Z3J3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
RGPD4Q7Z3J3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
RGPD4Q7Z3J3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC29.31■■■□□ 2.28
RGPD4Q7Z3J3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
RGPD4Q7Z3J3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
RGPD4Q7Z3J3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC29.31■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms