Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP1BQ7LBR1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP1BQ7LBR1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.72■□□□□ 0.91
CHMP1BQ7LBR1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP1BQ7LBR1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
CHMP1BQ7LBR1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP1BQ7LBR1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CHMP1BQ7LBR1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CHMP1BQ7LBR1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.72■□□□□ 0.91
CHMP1BQ7LBR1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.71■□□□□ 0.91
CHMP1BQ7LBR1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP1BQ7LBR1 PKD1P6-201ENST00000343738 4769 ntBASIC20.71■□□□□ 0.91
CHMP1BQ7LBR1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.71■□□□□ 0.91
CHMP1BQ7LBR1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP1BQ7LBR1 AL356740.2-201ENST00000601559 647 ntBASIC20.71■□□□□ 0.91
CHMP1BQ7LBR1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP1BQ7LBR1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP1BQ7LBR1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CHMP1BQ7LBR1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP1BQ7LBR1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP1BQ7LBR1 AC008406.3-201ENST00000620001 1374 ntBASIC20.71■□□□□ 0.91
CHMP1BQ7LBR1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
CHMP1BQ7LBR1 AC142381.3-201ENST00000568208 1670 ntBASIC20.7■□□□□ 0.91
CHMP1BQ7LBR1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.7■□□□□ 0.9
CHMP1BQ7LBR1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.7■□□□□ 0.9
CHMP1BQ7LBR1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP1BQ7LBR1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP1BQ7LBR1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CHMP1BQ7LBR1 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.7■□□□□ 0.9
CHMP1BQ7LBR1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CHMP1BQ7LBR1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.7■□□□□ 0.9
CHMP1BQ7LBR1 MIR6722-201ENST00000617286 78 ntBASIC20.7■□□□□ 0.9
CHMP1BQ7LBR1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.7■□□□□ 0.9
CHMP1BQ7LBR1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP1BQ7LBR1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP1BQ7LBR1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.7■□□□□ 0.9
CHMP1BQ7LBR1 AC012676.1-201ENST00000574705 1949 ntBASIC20.7■□□□□ 0.9
CHMP1BQ7LBR1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
CHMP1BQ7LBR1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP1BQ7LBR1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP1BQ7LBR1 AC022211.4-201ENST00000625094 2161 ntBASIC20.69■□□□□ 0.9
CHMP1BQ7LBR1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP1BQ7LBR1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP1BQ7LBR1 AL022069.1-201ENST00000568025 1636 ntBASIC20.69■□□□□ 0.9
CHMP1BQ7LBR1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP1BQ7LBR1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.69■□□□□ 0.9
CHMP1BQ7LBR1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.69■□□□□ 0.9
CHMP1BQ7LBR1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.69■□□□□ 0.9
CHMP1BQ7LBR1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CHMP1BQ7LBR1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP1BQ7LBR1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.68■□□□□ 0.9
CHMP1BQ7LBR1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP1BQ7LBR1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.68■□□□□ 0.9
CHMP1BQ7LBR1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP1BQ7LBR1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP1BQ7LBR1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP1BQ7LBR1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP1BQ7LBR1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP1BQ7LBR1 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.68■□□□□ 0.9
CHMP1BQ7LBR1 AC004448.1-201ENST00000458332 883 ntBASIC20.68■□□□□ 0.9
CHMP1BQ7LBR1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.68■□□□□ 0.9
CHMP1BQ7LBR1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CHMP1BQ7LBR1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP1BQ7LBR1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP1BQ7LBR1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.68■□□□□ 0.9
CHMP1BQ7LBR1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CHMP1BQ7LBR1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.67■□□□□ 0.9
CHMP1BQ7LBR1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.67■□□□□ 0.9
CHMP1BQ7LBR1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.67■□□□□ 0.9
CHMP1BQ7LBR1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP1BQ7LBR1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.67■□□□□ 0.9
CHMP1BQ7LBR1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.67■□□□□ 0.9
CHMP1BQ7LBR1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.67■□□□□ 0.9
CHMP1BQ7LBR1 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.67■□□□□ 0.9
CHMP1BQ7LBR1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.67■□□□□ 0.9
CHMP1BQ7LBR1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.67■□□□□ 0.9
CHMP1BQ7LBR1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.67■□□□□ 0.9
CHMP1BQ7LBR1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP1BQ7LBR1 AP003733.4-201ENST00000623785 1697 ntBASIC20.67■□□□□ 0.9
CHMP1BQ7LBR1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP1BQ7LBR1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP1BQ7LBR1 CLDN5-201ENST00000403084 2357 ntBASIC20.66■□□□□ 0.9
CHMP1BQ7LBR1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
CHMP1BQ7LBR1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP1BQ7LBR1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.66■□□□□ 0.9
CHMP1BQ7LBR1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.66■□□□□ 0.9
CHMP1BQ7LBR1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.66■□□□□ 0.9
CHMP1BQ7LBR1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CHMP1BQ7LBR1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP1BQ7LBR1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP1BQ7LBR1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP1BQ7LBR1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP1BQ7LBR1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.65■□□□□ 0.9
CHMP1BQ7LBR1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP1BQ7LBR1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP1BQ7LBR1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP1BQ7LBR1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP1BQ7LBR1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.65■□□□□ 0.9
CHMP1BQ7LBR1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.65■□□□□ 0.9
CHMP1BQ7LBR1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms