Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 VAC7YNL054W 3498 nt3.93□□□□□ -1.78
HRD1Q08109 YOL153CYOL153C 1746 nt3.93□□□□□ -1.78
HRD1Q08109 RAD30YDR419W 1899 nt3.93□□□□□ -1.78
HRD1Q08109 SUT1YGL162W 900 nt3.93□□□□□ -1.78
HRD1Q08109 YLR125WYLR125W 411 nt3.93□□□□□ -1.78
HRD1Q08109 BBC1YJL020C 3474 nt3.93□□□□□ -1.78
HRD1Q08109 TUB2YFL037W 1374 nt3.92□□□□□ -1.78
HRD1Q08109 HNT2YDR305C 654 nt3.92□□□□□ -1.78
HRD1Q08109 RIP1YEL024W 648 nt3.92□□□□□ -1.78
HRD1Q08109 tK(CUU)CtK(CUU)C 73 nt3.92□□□□□ -1.78
HRD1Q08109 tK(CUU)D1tK(CUU)D1 73 nt3.92□□□□□ -1.78
HRD1Q08109 tK(CUU)D2tK(CUU)D2 73 nt3.92□□□□□ -1.78
HRD1Q08109 tK(CUU)E1tK(CUU)E1 73 nt3.92□□□□□ -1.78
HRD1Q08109 tK(CUU)E2tK(CUU)E2 73 nt3.92□□□□□ -1.78
HRD1Q08109 tK(CUU)FtK(CUU)F 73 nt3.92□□□□□ -1.78
HRD1Q08109 tK(CUU)G1tK(CUU)G1 73 nt3.92□□□□□ -1.78
HRD1Q08109 tK(CUU)G2tK(CUU)G2 73 nt3.92□□□□□ -1.78
HRD1Q08109 tK(CUU)G3tK(CUU)G3 73 nt3.92□□□□□ -1.78
HRD1Q08109 LCP5YER127W 1074 nt3.92□□□□□ -1.78
HRD1Q08109 tK(CUU)ItK(CUU)I 73 nt3.92□□□□□ -1.78
HRD1Q08109 tK(CUU)JtK(CUU)J 73 nt3.92□□□□□ -1.78
HRD1Q08109 tK(CUU)KtK(CUU)K 73 nt3.92□□□□□ -1.78
HRD1Q08109 tK(CUU)MtK(CUU)M 73 nt3.92□□□□□ -1.78
HRD1Q08109 tK(CUU)PtK(CUU)P 73 nt3.92□□□□□ -1.78
HRD1Q08109 ARC1YGL105W 1131 nt3.92□□□□□ -1.78
HRD1Q08109 YNG2YHR090C 849 nt3.92□□□□□ -1.78
HRD1Q08109 PUS5YLR165C 765 nt3.92□□□□□ -1.78
HRD1Q08109 MAP1YLR244C 1164 nt3.92□□□□□ -1.78
HRD1Q08109 BUD7YOR299W 2241 nt3.92□□□□□ -1.78
HRD1Q08109 EUG1YDR518W 1554 nt3.92□□□□□ -1.78
HRD1Q08109 YLR152CYLR152C 1731 nt3.92□□□□□ -1.78
HRD1Q08109 BSC5YNR069C 1470 nt3.92□□□□□ -1.78
HRD1Q08109 STE12YHR084W 2067 nt3.91□□□□□ -1.78
HRD1Q08109 YHR177WYHR177W 1362 nt3.91□□□□□ -1.78
HRD1Q08109 PDR5YOR153W 4536 nt3.91□□□□□ -1.78
HRD1Q08109 TRM8YDL201W 861 nt3.91□□□□□ -1.78
HRD1Q08109 PRM10YJL108C 1152 nt3.91□□□□□ -1.78
HRD1Q08109 YBL006W-AYBL006W-A 150 nt3.91□□□□□ -1.78
HRD1Q08109 ADD37YMR184W 597 nt3.91□□□□□ -1.78
HRD1Q08109 BUD17YNR027W 954 nt3.91□□□□□ -1.78
HRD1Q08109 TAF5YBR198C 2397 nt3.91□□□□□ -1.78
HRD1Q08109 TRS85YDR108W 2097 nt3.91□□□□□ -1.78
HRD1Q08109 SUP35YDR172W 2058 nt3.91□□□□□ -1.78
HRD1Q08109 MET3YJR010W 1536 nt3.9□□□□□ -1.78
HRD1Q08109 RRB1YMR131C 1536 nt3.9□□□□□ -1.78
HRD1Q08109 YPR169W-AYPR169W-A 219 nt3.9□□□□□ -1.79
HRD1Q08109 YPR170W-BYPR170W-B 258 nt3.9□□□□□ -1.79
HRD1Q08109 KIC1YHR102W 3243 nt3.9□□□□□ -1.79
HRD1Q08109 FRE7YOL152W 1863 nt3.9□□□□□ -1.79
HRD1Q08109 GSY1YFR015C 2127 nt3.89□□□□□ -1.79
HRD1Q08109 UBP7YIL156W 3216 nt3.89□□□□□ -1.79
HRD1Q08109 ARO2YGL148W 1131 nt3.89□□□□□ -1.79
HRD1Q08109 NVJ1YHR195W 966 nt3.89□□□□□ -1.79
HRD1Q08109 GPP1YIL053W 753 nt3.89□□□□□ -1.79
HRD1Q08109 YJL215CYJL215C 360 nt3.89□□□□□ -1.79
HRD1Q08109 ERG3YLR056W 1098 nt3.89□□□□□ -1.79
HRD1Q08109 YAR019W-AYAR019W-A 333 nt3.89□□□□□ -1.79
HRD1Q08109 NCE102YPR149W 522 nt3.89□□□□□ -1.79
HRD1Q08109 HOS3YPL116W 2094 nt3.89□□□□□ -1.79
HRD1Q08109 RAD1YPL022W 3303 nt3.88□□□□□ -1.79
HRD1Q08109 YAP1802YGR241C 1707 nt3.88□□□□□ -1.79
HRD1Q08109 SNF11YDR073W 510 nt3.88□□□□□ -1.79
HRD1Q08109 YDR545C-AYDR545C-A 480 nt3.88□□□□□ -1.79
HRD1Q08109 YEL077W-AYEL077W-A 483 nt3.88□□□□□ -1.79
HRD1Q08109 YER190C-BYER190C-B 483 nt3.88□□□□□ -1.79
HRD1Q08109 YFL068WYFL068W 483 nt3.88□□□□□ -1.79
HRD1Q08109 YGR296C-BYGR296C-B 483 nt3.88□□□□□ -1.79
HRD1Q08109 YHL050W-AYHL050W-A 483 nt3.88□□□□□ -1.79
HRD1Q08109 YHR219C-AYHR219C-A 483 nt3.88□□□□□ -1.79
HRD1Q08109 YIL177W-AYIL177W-A 483 nt3.88□□□□□ -1.79
HRD1Q08109 YIR017W-AYIR017W-A 600 nt3.88□□□□□ -1.79
HRD1Q08109 YJL225W-AYJL225W-A 483 nt3.88□□□□□ -1.79
HRD1Q08109 YLL066W-AYLL066W-A 483 nt3.88□□□□□ -1.79
HRD1Q08109 YLL067W-AYLL067W-A 483 nt3.88□□□□□ -1.79
HRD1Q08109 YLR466C-AYLR466C-A 483 nt3.88□□□□□ -1.79
HRD1Q08109 YLR467C-AYLR467C-A 483 nt3.88□□□□□ -1.79
HRD1Q08109 YML133W-BYML133W-B 483 nt3.88□□□□□ -1.79
HRD1Q08109 YNL339W-BYNL339W-B 483 nt3.88□□□□□ -1.79
HRD1Q08109 YBL113W-AYBL113W-A 483 nt3.88□□□□□ -1.79
HRD1Q08109 YOR396C-AYOR396C-A 483 nt3.88□□□□□ -1.79
HRD1Q08109 YPL283W-BYPL283W-B 483 nt3.88□□□□□ -1.79
HRD1Q08109 YPR204C-AYPR204C-A 483 nt3.88□□□□□ -1.79
HRD1Q08109 OM14YBR230C 405 nt3.88□□□□□ -1.79
HRD1Q08109 RAD28YDR030C 1521 nt3.88□□□□□ -1.79
HRD1Q08109 KGD1YIL125W 3045 nt3.88□□□□□ -1.79
HRD1Q08109 YND1YER005W 1893 nt3.88□□□□□ -1.79
HRD1Q08109 TDA11YHR159W 1515 nt3.87□□□□□ -1.79
HRD1Q08109 ATP5YDR298C 639 nt3.87□□□□□ -1.79
HRD1Q08109 CAB1YDR531W 1104 nt3.87□□□□□ -1.79
HRD1Q08109 WSS1YHR134W 810 nt3.87□□□□□ -1.79
HRD1Q08109 PEX22YAL055W 543 nt3.87□□□□□ -1.79
HRD1Q08109 APS1YLR170C 471 nt3.87□□□□□ -1.79
HRD1Q08109 AKL1YBR059C 3327 nt3.87□□□□□ -1.79
HRD1Q08109 ULS1YOR191W 4860 nt3.87□□□□□ -1.79
HRD1Q08109 DIP2YLR129W 2832 nt3.86□□□□□ -1.79
HRD1Q08109 APC4YDR118W 1959 nt3.86□□□□□ -1.79
HRD1Q08109 KRE9YJL174W 831 nt3.86□□□□□ -1.79
HRD1Q08109 ROT1YMR200W 771 nt3.86□□□□□ -1.79
HRD1Q08109 GPI12YMR281W 915 nt3.86□□□□□ -1.79
HRD1Q08109 SLZ1YNL196C 897 nt3.86□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 15.9 ms