Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 MET3YJR010W 1536 nt5.12□□□□□ -1.59
VPS38Q05919 NOC4YPR144C 1659 nt5.12□□□□□ -1.59
VPS38Q05919 RTC5YOR118W 1704 nt5.11□□□□□ -1.59
VPS38Q05919 SNF3YDL194W 2655 nt5.11□□□□□ -1.59
VPS38Q05919 NPY1YGL067W 1155 nt5.11□□□□□ -1.59
VPS38Q05919 YHR214WYHR214W 612 nt5.11□□□□□ -1.59
VPS38Q05919 YIL028WYIL028W 399 nt5.11□□□□□ -1.59
VPS38Q05919 RPL43BYJR094W-A 279 nt5.11□□□□□ -1.59
VPS38Q05919 YAR066WYAR066W 612 nt5.11□□□□□ -1.59
VPS38Q05919 YLR402WYLR402W 192 nt5.11□□□□□ -1.59
VPS38Q05919 YNL143CYNL143C 393 nt5.11□□□□□ -1.59
VPS38Q05919 snR3snR3 194 nt5.11□□□□□ -1.59
VPS38Q05919 SYP1YCR030C 2613 nt5.11□□□□□ -1.59
VPS38Q05919 SER33YIL074C 1410 nt5.11□□□□□ -1.59
VPS38Q05919 IBA57YJR122W 1494 nt5.11□□□□□ -1.59
VPS38Q05919 PCL9YDL179W 915 nt5.1□□□□□ -1.59
VPS38Q05919 SAS4YDR181C 1446 nt5.1□□□□□ -1.59
VPS38Q05919 GRX4YER174C 735 nt5.1□□□□□ -1.59
VPS38Q05919 YNG2YHR090C 849 nt5.1□□□□□ -1.59
VPS38Q05919 GRE3YHR104W 984 nt5.1□□□□□ -1.59
VPS38Q05919 YJR085CYJR085C 318 nt5.1□□□□□ -1.59
VPS38Q05919 ECM1YAL059W 639 nt5.1□□□□□ -1.59
VPS38Q05919 PSR1YLL010C 1284 nt5.1□□□□□ -1.59
VPS38Q05919 VTA1YLR181C 993 nt5.1□□□□□ -1.59
VPS38Q05919 SSB2YNL209W 1842 nt5.1□□□□□ -1.59
VPS38Q05919 COT1YOR316C 1320 nt5.1□□□□□ -1.59
VPS38Q05919 SEC39YLR440C 2130 nt5.09□□□□□ -1.59
VPS38Q05919 YAP1802YGR241C 1707 nt5.09□□□□□ -1.59
VPS38Q05919 FKH1YIL131C 1455 nt5.09□□□□□ -1.59
VPS38Q05919 ADE13YLR359W 1449 nt5.09□□□□□ -1.59
VPS38Q05919 YDL183CYDL183C 963 nt5.09□□□□□ -1.59
VPS38Q05919 YFR035CYFR035C 345 nt5.09□□□□□ -1.59
VPS38Q05919 YPL199CYPL199C 723 nt5.09□□□□□ -1.59
VPS38Q05919 RAD30YDR419W 1899 nt5.09□□□□□ -1.6
VPS38Q05919 RCK2YLR248W 1833 nt5.09□□□□□ -1.6
VPS38Q05919 IMA1YGR287C 1770 nt5.09□□□□□ -1.6
VPS38Q05919 HXT7YDR342C 1713 nt5.09□□□□□ -1.6
VPS38Q05919 HXT6YDR343C 1713 nt5.09□□□□□ -1.6
VPS38Q05919 MEC3YLR288C 1425 nt5.08□□□□□ -1.6
VPS38Q05919 MPC54YOR177C 1395 nt5.08□□□□□ -1.6
VPS38Q05919 DBR1YKL149C 1218 nt5.08□□□□□ -1.6
VPS38Q05919 YAR019W-AYAR019W-A 333 nt5.08□□□□□ -1.6
VPS38Q05919 YPL073CYPL073C 486 nt5.08□□□□□ -1.6
VPS38Q05919 CTR1YPR124W 1221 nt5.08□□□□□ -1.6
VPS38Q05919 YPR169W-AYPR169W-A 219 nt5.08□□□□□ -1.6
VPS38Q05919 YPR170W-BYPR170W-B 258 nt5.08□□□□□ -1.6
VPS38Q05919 YCL041CYCL041C 495 nt5.08□□□□□ -1.6
VPS38Q05919 RAD28YDR030C 1521 nt5.07□□□□□ -1.6
VPS38Q05919 RRB1YMR131C 1536 nt5.07□□□□□ -1.6
VPS38Q05919 OMS1YDR316W 1416 nt5.07□□□□□ -1.6
VPS38Q05919 MTC1YJL123C 1437 nt5.07□□□□□ -1.6
VPS38Q05919 PUT1YLR142W 1431 nt5.07□□□□□ -1.6
VPS38Q05919 YDR445CYDR445C 408 nt5.07□□□□□ -1.6
VPS38Q05919 PFA5YDR459C 1125 nt5.07□□□□□ -1.6
VPS38Q05919 YLR124WYLR124W 345 nt5.07□□□□□ -1.6
VPS38Q05919 YIM1YMR152W 1098 nt5.07□□□□□ -1.6
VPS38Q05919 CKB2YOR039W 777 nt5.07□□□□□ -1.6
VPS38Q05919 ISA2YPR067W 558 nt5.07□□□□□ -1.6
VPS38Q05919 SIF2YBR103W 1608 nt5.07□□□□□ -1.6
VPS38Q05919 IFM1YOL023W 2031 nt5.07□□□□□ -1.6
VPS38Q05919 AKL1YBR059C 3327 nt5.07□□□□□ -1.6
VPS38Q05919 YMR196WYMR196W 3267 nt5.06□□□□□ -1.6
VPS38Q05919 snR57snR57 88 nt5.06□□□□□ -1.6
VPS38Q05919 HNT2YDR305C 654 nt5.06□□□□□ -1.6
VPS38Q05919 ERV14YGL054C 417 nt5.06□□□□□ -1.6
VPS38Q05919 DCD1YHR144C 939 nt5.06□□□□□ -1.6
VPS38Q05919 SLZ1YNL196C 897 nt5.06□□□□□ -1.6
VPS38Q05919 KGD1YIL125W 3045 nt5.05□□□□□ -1.6
VPS38Q05919 LSM6YDR378C 261 nt5.05□□□□□ -1.6
VPS38Q05919 GPP1YIL053W 753 nt5.05□□□□□ -1.6
VPS38Q05919 MFA2YNL145W 117 nt5.05□□□□□ -1.6
VPS38Q05919 NRG2YBR066C 663 nt5.05□□□□□ -1.6
VPS38Q05919 YTA12YMR089C 2478 nt5.05□□□□□ -1.6
VPS38Q05919 BUD7YOR299W 2241 nt5.05□□□□□ -1.6
VPS38Q05919 MIF2YKL089W 1650 nt5.05□□□□□ -1.6
VPS38Q05919 UTP6YDR449C 1323 nt5.04□□□□□ -1.6
VPS38Q05919 APC4YDR118W 1959 nt5.04□□□□□ -1.6
VPS38Q05919 UBA2YDR390C 1911 nt5.04□□□□□ -1.6
VPS38Q05919 YFL064CYFL064C 525 nt5.04□□□□□ -1.6
VPS38Q05919 YGR066CYGR066C 879 nt5.04□□□□□ -1.6
VPS38Q05919 DAL3YIR032C 588 nt5.04□□□□□ -1.6
VPS38Q05919 SPC24YMR117C 642 nt5.04□□□□□ -1.6
VPS38Q05919 YPR202WYPR202W 717 nt5.04□□□□□ -1.6
VPS38Q05919 APL6YGR261C 2430 nt5.04□□□□□ -1.6
VPS38Q05919 KAP114YGL241W 3015 nt5.03□□□□□ -1.6
VPS38Q05919 YDR545C-AYDR545C-A 480 nt5.03□□□□□ -1.6
VPS38Q05919 RIP1YEL024W 648 nt5.03□□□□□ -1.6
VPS38Q05919 YEL077W-AYEL077W-A 483 nt5.03□□□□□ -1.6
VPS38Q05919 YER190C-BYER190C-B 483 nt5.03□□□□□ -1.6
VPS38Q05919 YFL068WYFL068W 483 nt5.03□□□□□ -1.6
VPS38Q05919 YGR296C-BYGR296C-B 483 nt5.03□□□□□ -1.6
VPS38Q05919 YHL050W-AYHL050W-A 483 nt5.03□□□□□ -1.6
VPS38Q05919 NVJ1YHR195W 966 nt5.03□□□□□ -1.6
VPS38Q05919 YHR219C-AYHR219C-A 483 nt5.03□□□□□ -1.6
VPS38Q05919 YIL177W-AYIL177W-A 483 nt5.03□□□□□ -1.6
VPS38Q05919 YJL225W-AYJL225W-A 483 nt5.03□□□□□ -1.6
VPS38Q05919 YLL066W-AYLL066W-A 483 nt5.03□□□□□ -1.6
VPS38Q05919 YLL067W-AYLL067W-A 483 nt5.03□□□□□ -1.6
VPS38Q05919 YLR346CYLR346C 306 nt5.03□□□□□ -1.6
VPS38Q05919 YLR466C-AYLR466C-A 483 nt5.03□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms