Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22■■□□□ 1.11
Trim30cD3YVI9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trim30cD3YVI9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Trim30cD3YVI9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22■■□□□ 1.11
Trim30cD3YVI9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC22■■□□□ 1.11
Trim30cD3YVI9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Trim30cD3YVI9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim30cD3YVI9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim30cD3YVI9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim30cD3YVI9 Gm14117-201ENSMUST00000122417 843 ntBASIC21.99■■□□□ 1.11
Trim30cD3YVI9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.99■■□□□ 1.11
Trim30cD3YVI9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.99■■□□□ 1.11
Trim30cD3YVI9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim30cD3YVI9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim30cD3YVI9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trim30cD3YVI9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim30cD3YVI9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim30cD3YVI9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.98■■□□□ 1.11
Trim30cD3YVI9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim30cD3YVI9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim30cD3YVI9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim30cD3YVI9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
Trim30cD3YVI9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim30cD3YVI9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim30cD3YVI9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim30cD3YVI9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC21.97■■□□□ 1.11
Trim30cD3YVI9 Etf1-202ENSMUST00000180351 108 ntBASIC21.97■■□□□ 1.11
Trim30cD3YVI9 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.97■■□□□ 1.11
Trim30cD3YVI9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim30cD3YVI9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim30cD3YVI9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim30cD3YVI9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim30cD3YVI9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim30cD3YVI9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Trim30cD3YVI9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim30cD3YVI9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Trim30cD3YVI9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
Trim30cD3YVI9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim30cD3YVI9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim30cD3YVI9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Trim30cD3YVI9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim30cD3YVI9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Trim30cD3YVI9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim30cD3YVI9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Trim30cD3YVI9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim30cD3YVI9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim30cD3YVI9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.95■■□□□ 1.1
Trim30cD3YVI9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.95■■□□□ 1.1
Trim30cD3YVI9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.95■■□□□ 1.1
Trim30cD3YVI9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim30cD3YVI9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim30cD3YVI9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim30cD3YVI9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim30cD3YVI9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Trim30cD3YVI9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim30cD3YVI9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.94■■□□□ 1.1
Trim30cD3YVI9 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.94■■□□□ 1.1
Trim30cD3YVI9 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.94■■□□□ 1.1
Trim30cD3YVI9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.94■■□□□ 1.1
Trim30cD3YVI9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim30cD3YVI9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim30cD3YVI9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim30cD3YVI9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Trim30cD3YVI9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trim30cD3YVI9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim30cD3YVI9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim30cD3YVI9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim30cD3YVI9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim30cD3YVI9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim30cD3YVI9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim30cD3YVI9 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.92■■□□□ 1.1
Trim30cD3YVI9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim30cD3YVI9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Trim30cD3YVI9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim30cD3YVI9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Trim30cD3YVI9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim30cD3YVI9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.92■■□□□ 1.1
Trim30cD3YVI9 Gm10399-202ENSMUST00000202768 748 ntBASIC21.92■■□□□ 1.1
Trim30cD3YVI9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim30cD3YVI9 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.92■■□□□ 1.1
Trim30cD3YVI9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim30cD3YVI9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim30cD3YVI9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim30cD3YVI9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trim30cD3YVI9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Trim30cD3YVI9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.91■■□□□ 1.1
Trim30cD3YVI9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Trim30cD3YVI9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim30cD3YVI9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.9■■□□□ 1.1
Trim30cD3YVI9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim30cD3YVI9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim30cD3YVI9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim30cD3YVI9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim30cD3YVI9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.9■■□□□ 1.1
Trim30cD3YVI9 Gm40881-201ENSMUST00000223397 166 ntBASIC21.9■■□□□ 1.1
Trim30cD3YVI9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim30cD3YVI9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Trim30cD3YVI9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Trim30cD3YVI9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Trim30cD3YVI9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.89■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms