Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.72■■□□□ 1.23
CCDC163A0A0D9SF12 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CCDC163A0A0D9SF12 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
CCDC163A0A0D9SF12 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.72■■□□□ 1.23
CCDC163A0A0D9SF12 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.72■■□□□ 1.23
CCDC163A0A0D9SF12 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.72■■□□□ 1.23
CCDC163A0A0D9SF12 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
CCDC163A0A0D9SF12 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
CCDC163A0A0D9SF12 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.72■■□□□ 1.23
CCDC163A0A0D9SF12 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.71■■□□□ 1.23
CCDC163A0A0D9SF12 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC163A0A0D9SF12 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.71■■□□□ 1.23
CCDC163A0A0D9SF12 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.71■■□□□ 1.23
CCDC163A0A0D9SF12 IGHV3-19-201ENST00000521488 291 ntBASIC22.71■■□□□ 1.23
CCDC163A0A0D9SF12 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.71■■□□□ 1.23
CCDC163A0A0D9SF12 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.71■■□□□ 1.23
CCDC163A0A0D9SF12 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.71■■□□□ 1.23
CCDC163A0A0D9SF12 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC163A0A0D9SF12 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC163A0A0D9SF12 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.71■■□□□ 1.23
CCDC163A0A0D9SF12 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
CCDC163A0A0D9SF12 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.7■■□□□ 1.23
CCDC163A0A0D9SF12 SLC6A10P-202ENST00000431994 2058 ntBASIC22.7■■□□□ 1.23
CCDC163A0A0D9SF12 ID1-201ENST00000376105 1233 ntBASIC22.7■■□□□ 1.22
CCDC163A0A0D9SF12 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
CCDC163A0A0D9SF12 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.7■■□□□ 1.22
CCDC163A0A0D9SF12 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.7■■□□□ 1.22
CCDC163A0A0D9SF12 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CCDC163A0A0D9SF12 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CCDC163A0A0D9SF12 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CCDC163A0A0D9SF12 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.7■■□□□ 1.22
CCDC163A0A0D9SF12 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.69■■□□□ 1.22
CCDC163A0A0D9SF12 AC141586.4-201ENST00000624558 1573 ntBASIC22.69■■□□□ 1.22
CCDC163A0A0D9SF12 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CCDC163A0A0D9SF12 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC163A0A0D9SF12 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.69■■□□□ 1.22
CCDC163A0A0D9SF12 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.69■■□□□ 1.22
CCDC163A0A0D9SF12 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
CCDC163A0A0D9SF12 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.69■■□□□ 1.22
CCDC163A0A0D9SF12 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC163A0A0D9SF12 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.68■■□□□ 1.22
CCDC163A0A0D9SF12 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
CCDC163A0A0D9SF12 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC163A0A0D9SF12 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.68■■□□□ 1.22
CCDC163A0A0D9SF12 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.68■■□□□ 1.22
CCDC163A0A0D9SF12 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.68■■□□□ 1.22
CCDC163A0A0D9SF12 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.68■■□□□ 1.22
CCDC163A0A0D9SF12 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
CCDC163A0A0D9SF12 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC163A0A0D9SF12 AC012414.1-201ENST00000556676 535 ntBASIC22.68■■□□□ 1.22
CCDC163A0A0D9SF12 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.68■■□□□ 1.22
CCDC163A0A0D9SF12 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.68■■□□□ 1.22
CCDC163A0A0D9SF12 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC163A0A0D9SF12 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC163A0A0D9SF12 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC163A0A0D9SF12 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC163A0A0D9SF12 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC163A0A0D9SF12 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC163A0A0D9SF12 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.67■■□□□ 1.22
CCDC163A0A0D9SF12 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC163A0A0D9SF12 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC163A0A0D9SF12 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.67■■□□□ 1.22
CCDC163A0A0D9SF12 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.67■■□□□ 1.22
CCDC163A0A0D9SF12 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.67■■□□□ 1.22
CCDC163A0A0D9SF12 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC163A0A0D9SF12 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.67■■□□□ 1.22
CCDC163A0A0D9SF12 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CCDC163A0A0D9SF12 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC163A0A0D9SF12 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC163A0A0D9SF12 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.66■■□□□ 1.22
CCDC163A0A0D9SF12 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC163A0A0D9SF12 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC163A0A0D9SF12 AC004911.1-201ENST00000416316 871 ntBASIC22.66■■□□□ 1.22
CCDC163A0A0D9SF12 AC092803.2-201ENST00000564287 1899 ntBASIC22.66■■□□□ 1.22
CCDC163A0A0D9SF12 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC163A0A0D9SF12 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC163A0A0D9SF12 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
CCDC163A0A0D9SF12 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CCDC163A0A0D9SF12 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.65■■□□□ 1.22
CCDC163A0A0D9SF12 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC163A0A0D9SF12 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.65■■□□□ 1.22
CCDC163A0A0D9SF12 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.65■■□□□ 1.22
CCDC163A0A0D9SF12 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CCDC163A0A0D9SF12 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.65■■□□□ 1.22
CCDC163A0A0D9SF12 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.65■■□□□ 1.22
CCDC163A0A0D9SF12 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC163A0A0D9SF12 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.64■■□□□ 1.22
CCDC163A0A0D9SF12 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.64■■□□□ 1.22
CCDC163A0A0D9SF12 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CCDC163A0A0D9SF12 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCDC163A0A0D9SF12 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CCDC163A0A0D9SF12 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.64■■□□□ 1.21
CCDC163A0A0D9SF12 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CCDC163A0A0D9SF12 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.64■■□□□ 1.21
CCDC163A0A0D9SF12 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.64■■□□□ 1.21
CCDC163A0A0D9SF12 CCDC92B-201ENST00000575506 885 ntBASIC22.64■■□□□ 1.21
CCDC163A0A0D9SF12 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
CCDC163A0A0D9SF12 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.64■■□□□ 1.21
CCDC163A0A0D9SF12 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCDC163A0A0D9SF12 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms