Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 METTL26-204ENST00000397665 558 ntTSL 2 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 MIR943-201ENST00000401286 94 ntBASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 SOCS2P1-201ENST00000417727 557 ntBASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 DOC2GP-202ENST00000514950 1163 ntBASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 AP005019.2-201ENST00000615104 511 ntBASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 AC022144.1-201ENST00000602255 1580 ntBASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 F10-203ENST00000409306 1450 ntTSL 3 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 MEX3B-202ENST00000558133 4333 ntBASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 AL365181.3-201ENST00000605886 3222 ntBASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 AL442647.2-201ENST00000429864 857 ntBASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 DNAJB3-202ENST00000449667 1266 ntBASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 AC104596.2-201ENST00000512793 793 ntBASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 AC124283.3-201ENST00000570869 594 ntBASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 AC138696.2-201ENST00000607376 223 ntBASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 AC004790.1-201ENST00000612686 536 ntBASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
UBE2D4Q9Y2X8 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms