Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.16□□□□□ -0.14
PKP4Q99569 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.16□□□□□ -0.14
PKP4Q99569 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PKP4Q99569 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
PKP4Q99569 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.16□□□□□ -0.14
PKP4Q99569 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.16□□□□□ -0.14
PKP4Q99569 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PKP4Q99569 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PKP4Q99569 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.16□□□□□ -0.14
PKP4Q99569 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.16□□□□□ -0.14
PKP4Q99569 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PKP4Q99569 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PKP4Q99569 AC016397.2-201ENST00000624848 1985 ntBASIC14.16□□□□□ -0.14
PKP4Q99569 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
PKP4Q99569 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PKP4Q99569 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PKP4Q99569 AC005840.4-201ENST00000541242 2494 ntBASIC14.16□□□□□ -0.14
PKP4Q99569 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PKP4Q99569 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PKP4Q99569 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PKP4Q99569 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PKP4Q99569 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PKP4Q99569 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.15□□□□□ -0.14
PKP4Q99569 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PKP4Q99569 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
PKP4Q99569 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PKP4Q99569 CICP16-201ENST00000502609 2813 ntBASIC14.15□□□□□ -0.14
PKP4Q99569 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PKP4Q99569 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
PKP4Q99569 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PKP4Q99569 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PKP4Q99569 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PKP4Q99569 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PKP4Q99569 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PKP4Q99569 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PKP4Q99569 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PKP4Q99569 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
PKP4Q99569 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PKP4Q99569 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PKP4Q99569 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.15□□□□□ -0.14
PKP4Q99569 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PKP4Q99569 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
PKP4Q99569 KRT8P29-201ENST00000420409 1371 ntBASIC14.15□□□□□ -0.14
PKP4Q99569 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PKP4Q99569 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PKP4Q99569 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.15□□□□□ -0.14
PKP4Q99569 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.15□□□□□ -0.14
PKP4Q99569 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.15□□□□□ -0.14
PKP4Q99569 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.15□□□□□ -0.14
PKP4Q99569 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.15□□□□□ -0.14
PKP4Q99569 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.15□□□□□ -0.14
PKP4Q99569 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PKP4Q99569 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PKP4Q99569 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.15□□□□□ -0.14
PKP4Q99569 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.15□□□□□ -0.14
PKP4Q99569 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.15□□□□□ -0.14
PKP4Q99569 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PKP4Q99569 AL160314.3-201ENST00000556041 767 ntBASIC14.15□□□□□ -0.14
PKP4Q99569 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.15□□□□□ -0.14
PKP4Q99569 AC104982.3-201ENST00000581995 514 ntBASIC14.15□□□□□ -0.14
PKP4Q99569 AC091271.1-201ENST00000611877 1162 ntBASIC14.15□□□□□ -0.14
PKP4Q99569 AC005695.3-201ENST00000614522 232 ntBASIC14.15□□□□□ -0.14
PKP4Q99569 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.15□□□□□ -0.14
PKP4Q99569 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.15□□□□□ -0.14
PKP4Q99569 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.15□□□□□ -0.14
PKP4Q99569 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PKP4Q99569 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PKP4Q99569 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
PKP4Q99569 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.15□□□□□ -0.14
PKP4Q99569 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PKP4Q99569 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PKP4Q99569 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PKP4Q99569 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PKP4Q99569 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
PKP4Q99569 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PKP4Q99569 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PKP4Q99569 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.15□□□□□ -0.14
PKP4Q99569 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
PKP4Q99569 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PKP4Q99569 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
PKP4Q99569 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PKP4Q99569 AC144522.1-201ENST00000625111 1658 ntBASIC14.14□□□□□ -0.15
PKP4Q99569 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PKP4Q99569 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PKP4Q99569 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PKP4Q99569 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PKP4Q99569 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PKP4Q99569 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.14□□□□□ -0.15
PKP4Q99569 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PKP4Q99569 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.14□□□□□ -0.15
PKP4Q99569 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PKP4Q99569 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PKP4Q99569 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PKP4Q99569 MBLAC2-202ENST00000514906 1936 ntBASIC14.14□□□□□ -0.15
PKP4Q99569 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PKP4Q99569 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.14□□□□□ -0.15
PKP4Q99569 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PKP4Q99569 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PKP4Q99569 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.14□□□□□ -0.15
PKP4Q99569 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms