Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 COL6A4P2-202ENST00000504443 2753 ntBASIC12.96□□□□□ -0.33
ODF4Q2M2E3 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 AL442647.2-201ENST00000429864 857 ntBASIC12.96□□□□□ -0.33
ODF4Q2M2E3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 AC092364.2-202ENST00000597012 1073 ntBASIC12.96□□□□□ -0.33
ODF4Q2M2E3 AC133539.2-201ENST00000604757 467 ntBASIC12.96□□□□□ -0.33
ODF4Q2M2E3 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ODF4Q2M2E3 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ODF4Q2M2E3 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ODF4Q2M2E3 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ODF4Q2M2E3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
ODF4Q2M2E3 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.96□□□□□ -0.34
ODF4Q2M2E3 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.96□□□□□ -0.34
ODF4Q2M2E3 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
ODF4Q2M2E3 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.96□□□□□ -0.34
ODF4Q2M2E3 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.96□□□□□ -0.34
ODF4Q2M2E3 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
ODF4Q2M2E3 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ODF4Q2M2E3 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 AC020910.5-201ENST00000623668 1865 ntBASIC12.95□□□□□ -0.34
ODF4Q2M2E3 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 UGT1A2P-201ENST00000454886 866 ntBASIC12.95□□□□□ -0.34
ODF4Q2M2E3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 AC092552.1-201ENST00000547243 906 ntBASIC12.95□□□□□ -0.34
ODF4Q2M2E3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 AC005252.2-201ENST00000624630 1141 ntBASIC12.95□□□□□ -0.34
ODF4Q2M2E3 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 AC005252.3-201ENST00000623855 2258 ntBASIC12.95□□□□□ -0.34
ODF4Q2M2E3 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF4Q2M2E3 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms