Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.88□□□□□ -0.35
SOX2P48431 AC004890.2-204ENST00000481968 304 ntBASIC12.88□□□□□ -0.35
SOX2P48431 AC104596.2-201ENST00000512793 793 ntBASIC12.88□□□□□ -0.35
SOX2P48431 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.88□□□□□ -0.35
SOX2P48431 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.88□□□□□ -0.35
SOX2P48431 AC131206.1-201ENST00000538078 1211 ntBASIC12.88□□□□□ -0.35
SOX2P48431 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.88□□□□□ -0.35
SOX2P48431 MIR8072-201ENST00000614241 80 ntBASIC12.88□□□□□ -0.35
SOX2P48431 AL691403.2-201ENST00000618460 490 ntBASIC12.88□□□□□ -0.35
SOX2P48431 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SOX2P48431 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SOX2P48431 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.88□□□□□ -0.35
SOX2P48431 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SOX2P48431 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
SOX2P48431 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.88□□□□□ -0.35
SOX2P48431 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SOX2P48431 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SOX2P48431 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SOX2P48431 LINC02486-201ENST00000604157 3000 ntBASIC12.88□□□□□ -0.35
SOX2P48431 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SOX2P48431 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SOX2P48431 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SOX2P48431 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.88□□□□□ -0.35
SOX2P48431 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SOX2P48431 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SOX2P48431 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.88□□□□□ -0.35
SOX2P48431 AC015818.8-201ENST00000587907 1519 ntBASIC12.88□□□□□ -0.35
SOX2P48431 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SOX2P48431 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SOX2P48431 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SOX2P48431 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SOX2P48431 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
SOX2P48431 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SOX2P48431 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.87□□□□□ -0.35
SOX2P48431 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SOX2P48431 AC027612.1-201ENST00000445234 2395 ntBASIC12.87□□□□□ -0.35
SOX2P48431 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SOX2P48431 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.87□□□□□ -0.35
SOX2P48431 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SOX2P48431 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.87□□□□□ -0.35
SOX2P48431 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SOX2P48431 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SOX2P48431 AL445209.1-201ENST00000607269 3491 ntBASIC12.87□□□□□ -0.35
SOX2P48431 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SOX2P48431 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SOX2P48431 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SOX2P48431 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SOX2P48431 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SOX2P48431 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.87□□□□□ -0.35
SOX2P48431 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.87□□□□□ -0.35
SOX2P48431 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.87□□□□□ -0.35
SOX2P48431 GNAQP1-201ENST00000444815 1067 ntBASIC12.87□□□□□ -0.35
SOX2P48431 AL512638.1-201ENST00000457493 794 ntBASIC12.87□□□□□ -0.35
SOX2P48431 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SOX2P48431 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SOX2P48431 CBFB-203ENST00000561924 584 ntTSL 5 BASIC12.87□□□□□ -0.35
SOX2P48431 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.87□□□□□ -0.35
SOX2P48431 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.87□□□□□ -0.35
SOX2P48431 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.87□□□□□ -0.35
SOX2P48431 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SOX2P48431 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SOX2P48431 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.87□□□□□ -0.35
SOX2P48431 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SOX2P48431 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SOX2P48431 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SOX2P48431 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.87□□□□□ -0.35
SOX2P48431 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SOX2P48431 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SOX2P48431 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SOX2P48431 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SOX2P48431 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
SOX2P48431 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SOX2P48431 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
SOX2P48431 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SOX2P48431 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.87□□□□□ -0.35
SOX2P48431 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SOX2P48431 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SOX2P48431 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SOX2P48431 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.87□□□□□ -0.35
SOX2P48431 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.87□□□□□ -0.35
SOX2P48431 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SOX2P48431 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SOX2P48431 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.86□□□□□ -0.35
SOX2P48431 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SOX2P48431 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SOX2P48431 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SOX2P48431 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SOX2P48431 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SOX2P48431 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SOX2P48431 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.86□□□□□ -0.35
SOX2P48431 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SOX2P48431 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SOX2P48431 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SOX2P48431 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SOX2P48431 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SOX2P48431 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SOX2P48431 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.86□□□□□ -0.35
SOX2P48431 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
SOX2P48431 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SOX2P48431 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms