Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A1O14983 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A1O14983 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ATP2A1O14983 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.57■□□□□ 0.24
ATP2A1O14983 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
ATP2A1O14983 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A1O14983 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A1O14983 AL161932.2-201ENST00000435436 679 ntBASIC16.57■□□□□ 0.24
ATP2A1O14983 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.57■□□□□ 0.24
ATP2A1O14983 RN7SL277P-201ENST00000481521 288 ntBASIC16.57■□□□□ 0.24
ATP2A1O14983 ORAOV1P1-201ENST00000503108 395 ntBASIC16.57■□□□□ 0.24
ATP2A1O14983 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.57■□□□□ 0.24
ATP2A1O14983 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.57■□□□□ 0.24
ATP2A1O14983 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.57■□□□□ 0.24
ATP2A1O14983 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A1O14983 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.57■□□□□ 0.24
ATP2A1O14983 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ATP2A1O14983 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.57■□□□□ 0.24
ATP2A1O14983 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A1O14983 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A1O14983 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.57■□□□□ 0.24
ATP2A1O14983 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A1O14983 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A1O14983 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A1O14983 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ATP2A1O14983 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A1O14983 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A1O14983 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A1O14983 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.56■□□□□ 0.24
ATP2A1O14983 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.56■□□□□ 0.24
ATP2A1O14983 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A1O14983 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A1O14983 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A1O14983 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.56■□□□□ 0.24
ATP2A1O14983 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A1O14983 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ATP2A1O14983 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A1O14983 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A1O14983 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A1O14983 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A1O14983 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.56■□□□□ 0.24
ATP2A1O14983 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
ATP2A1O14983 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A1O14983 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.56■□□□□ 0.24
ATP2A1O14983 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC16.56■□□□□ 0.24
ATP2A1O14983 MRPL22P1-201ENST00000505398 616 ntBASIC16.56■□□□□ 0.24
ATP2A1O14983 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A1O14983 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
ATP2A1O14983 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.56■□□□□ 0.24
ATP2A1O14983 AC135983.4-201ENST00000564116 1262 ntBASIC16.56■□□□□ 0.24
ATP2A1O14983 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.56■□□□□ 0.24
ATP2A1O14983 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.56■□□□□ 0.24
ATP2A1O14983 MIR6074-201ENST00000612054 107 ntBASIC16.56■□□□□ 0.24
ATP2A1O14983 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A1O14983 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A1O14983 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.56■□□□□ 0.24
ATP2A1O14983 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A1O14983 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ATP2A1O14983 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ATP2A1O14983 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A1O14983 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.56■□□□□ 0.24
ATP2A1O14983 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A1O14983 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A1O14983 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.56■□□□□ 0.24
ATP2A1O14983 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ATP2A1O14983 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.56■□□□□ 0.24
ATP2A1O14983 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A1O14983 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A1O14983 AC099063.4-201ENST00000641099 1602 ntBASIC16.56■□□□□ 0.24
ATP2A1O14983 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ATP2A1O14983 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.55■□□□□ 0.24
ATP2A1O14983 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.55■□□□□ 0.24
ATP2A1O14983 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ATP2A1O14983 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ATP2A1O14983 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A1O14983 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A1O14983 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.55■□□□□ 0.24
ATP2A1O14983 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A1O14983 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ATP2A1O14983 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A1O14983 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A1O14983 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.55■□□□□ 0.24
ATP2A1O14983 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
ATP2A1O14983 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.55■□□□□ 0.24
ATP2A1O14983 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
ATP2A1O14983 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A1O14983 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A1O14983 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A1O14983 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.55■□□□□ 0.24
ATP2A1O14983 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.55■□□□□ 0.24
ATP2A1O14983 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.55■□□□□ 0.24
ATP2A1O14983 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ATP2A1O14983 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A1O14983 RN7SL8P-201ENST00000461771 266 ntBASIC16.55■□□□□ 0.24
ATP2A1O14983 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.55■□□□□ 0.24
ATP2A1O14983 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A1O14983 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.55■□□□□ 0.24
ATP2A1O14983 MIR4649-201ENST00000582839 64 ntBASIC16.55■□□□□ 0.24
ATP2A1O14983 AC104506.1-201ENST00000609247 429 ntBASIC16.55■□□□□ 0.24
ATP2A1O14983 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms