Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 CICP23-201ENST00000605013 2741 ntBASIC13.84□□□□□ -0.19
RIF1Q5UIP0 AC005332.8-201ENST00000622750 2735 ntBASIC13.84□□□□□ -0.19
RIF1Q5UIP0 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 LILRP1-201ENST00000444199 1370 ntBASIC13.84□□□□□ -0.19
RIF1Q5UIP0 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 CRIP1P2-201ENST00000425396 228 ntBASIC13.84□□□□□ -0.19
RIF1Q5UIP0 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 RBM14-205ENST00000443702 732 ntTSL 3 BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 HNRNPA1P10-201ENST00000444945 962 ntBASIC13.84□□□□□ -0.19
RIF1Q5UIP0 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 AC140658.4-201ENST00000561990 352 ntBASIC13.84□□□□□ -0.19
RIF1Q5UIP0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 AC010335.3-201ENST00000623767 531 ntBASIC13.84□□□□□ -0.19
RIF1Q5UIP0 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
RIF1Q5UIP0 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
RIF1Q5UIP0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RIF1Q5UIP0 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RIF1Q5UIP0 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RIF1Q5UIP0 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RIF1Q5UIP0 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.83□□□□□ -0.19
RIF1Q5UIP0 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RIF1Q5UIP0 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RIF1Q5UIP0 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 BATF-202ENST00000555504 361 ntTSL 2 BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 RPS5-205ENST00000598495 800 ntTSL 3 BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 AC134878.2-201ENST00000620700 1265 ntBASIC13.83□□□□□ -0.2
RIF1Q5UIP0 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 AC004910.1-201ENST00000433493 787 ntBASIC13.83□□□□□ -0.2
RIF1Q5UIP0 DUX4L31-201ENST00000446466 1136 ntBASIC13.83□□□□□ -0.2
RIF1Q5UIP0 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 AC112694.1-202ENST00000540985 943 ntBASIC13.83□□□□□ -0.2
RIF1Q5UIP0 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 AC126755.5-201ENST00000622756 267 ntBASIC13.83□□□□□ -0.2
RIF1Q5UIP0 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RIF1Q5UIP0 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 GOLGA2P8-201ENST00000505201 779 ntBASIC13.82□□□□□ -0.2
RIF1Q5UIP0 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 MT3-202ENST00000561640 514 ntTSL 3 BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms