Protein–RNA interactions for Protein: Q9C0H6

KLHL4, Kelch-like protein 4, humanhuman

Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL4Q9C0H6 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL4Q9C0H6 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL4Q9C0H6 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL4Q9C0H6 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
KLHL4Q9C0H6 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.17□□□□□ -0.14
KLHL4Q9C0H6 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC14.17□□□□□ -0.14
KLHL4Q9C0H6 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL4Q9C0H6 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.17□□□□□ -0.14
KLHL4Q9C0H6 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL4Q9C0H6 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
KLHL4Q9C0H6 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL4Q9C0H6 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
KLHL4Q9C0H6 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
KLHL4Q9C0H6 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL4Q9C0H6 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL4Q9C0H6 RN7SL832P-201ENST00000607781 1756 ntBASIC14.17□□□□□ -0.14
KLHL4Q9C0H6 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
KLHL4Q9C0H6 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 AL133267.1-201ENST00000398220 340 ntBASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 AL512361.1-201ENST00000554200 418 ntBASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 AC044860.1-202ENST00000559481 777 ntBASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 PCDHA5-203ENST00000614258 4248 ntBASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 AC007541.1-201ENST00000570282 1469 ntBASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.16□□□□□ -0.14
KLHL4Q9C0H6 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL4Q9C0H6 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
KLHL4Q9C0H6 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL4Q9C0H6 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
KLHL4Q9C0H6 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.15□□□□□ -0.14
KLHL4Q9C0H6 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL4Q9C0H6 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL4Q9C0H6 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL4Q9C0H6 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL4Q9C0H6 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL4Q9C0H6 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL4Q9C0H6 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL4Q9C0H6 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL4Q9C0H6 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL4Q9C0H6 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL4Q9C0H6 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
KLHL4Q9C0H6 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
KLHL4Q9C0H6 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL4Q9C0H6 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.15□□□□□ -0.14
KLHL4Q9C0H6 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL4Q9C0H6 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL4Q9C0H6 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms