Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 AL590440.2-201ENST00000641973 1595 ntBASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HERC4Q5GLZ8 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HERC4Q5GLZ8 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.33■□□□□ 0.21
HERC4Q5GLZ8 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HERC4Q5GLZ8 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HERC4Q5GLZ8 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
HERC4Q5GLZ8 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HERC4Q5GLZ8 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC16.33■□□□□ 0.21
HERC4Q5GLZ8 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HERC4Q5GLZ8 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.33■□□□□ 0.21
HERC4Q5GLZ8 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HERC4Q5GLZ8 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
HERC4Q5GLZ8 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.33■□□□□ 0.21
HERC4Q5GLZ8 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 MTX1P1-201ENST00000440904 838 ntBASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 MAGEA5-201ENST00000446757 942 ntBASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 AL136301.1-201ENST00000615830 422 ntBASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.33■□□□□ 0.2
HERC4Q5GLZ8 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 RPL17P11-201ENST00000417593 544 ntBASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 IMP3P2-201ENST00000489760 475 ntBASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HERC4Q5GLZ8 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms