Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 INGX-202ENST00000489074 768 ntBASIC12.78□□□□□ -0.36
GDNFP39905 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.78□□□□□ -0.36
GDNFP39905 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.78□□□□□ -0.36
GDNFP39905 AC023310.3-201ENST00000557027 670 ntBASIC12.78□□□□□ -0.36
GDNFP39905 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.78□□□□□ -0.36
GDNFP39905 AC100756.1-201ENST00000562736 682 ntBASIC12.78□□□□□ -0.36
GDNFP39905 AC138749.3-201ENST00000567691 622 ntBASIC12.78□□□□□ -0.36
GDNFP39905 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC12.78□□□□□ -0.36
GDNFP39905 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.78□□□□□ -0.36
GDNFP39905 AC116165.1-201ENST00000611806 668 ntBASIC12.78□□□□□ -0.36
GDNFP39905 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GDNFP39905 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GDNFP39905 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GDNFP39905 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GDNFP39905 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GDNFP39905 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.78□□□□□ -0.36
GDNFP39905 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GDNFP39905 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
GDNFP39905 AL137783.1-201ENST00000623494 1896 ntBASIC12.78□□□□□ -0.36
GDNFP39905 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
GDNFP39905 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.78□□□□□ -0.36
GDNFP39905 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GDNFP39905 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
GDNFP39905 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GDNFP39905 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GDNFP39905 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
GDNFP39905 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.77□□□□□ -0.36
GDNFP39905 HSPA8P5-201ENST00000456928 2069 ntBASIC12.77□□□□□ -0.36
GDNFP39905 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GDNFP39905 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
GDNFP39905 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.77□□□□□ -0.36
GDNFP39905 MYADML-201ENST00000474610 2147 ntBASIC12.77□□□□□ -0.36
GDNFP39905 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
GDNFP39905 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
GDNFP39905 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.77□□□□□ -0.36
GDNFP39905 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.77□□□□□ -0.36
GDNFP39905 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GDNFP39905 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
GDNFP39905 AL023775.1-201ENST00000454907 1746 ntBASIC12.77□□□□□ -0.36
GDNFP39905 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
GDNFP39905 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GDNFP39905 AC215219.1-201ENST00000400706 1817 ntBASIC12.77□□□□□ -0.37
GDNFP39905 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GDNFP39905 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GDNFP39905 SPDYE19P-201ENST00000338590 713 ntBASIC12.77□□□□□ -0.37
GDNFP39905 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GDNFP39905 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
GDNFP39905 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
GDNFP39905 MIR661-201ENST00000384842 89 ntBASIC12.77□□□□□ -0.37
GDNFP39905 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GDNFP39905 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.77□□□□□ -0.37
GDNFP39905 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.77□□□□□ -0.37
GDNFP39905 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.77□□□□□ -0.37
GDNFP39905 DOC2GP-202ENST00000514950 1163 ntBASIC12.77□□□□□ -0.37
GDNFP39905 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.77□□□□□ -0.37
GDNFP39905 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.77□□□□□ -0.37
GDNFP39905 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.77□□□□□ -0.37
GDNFP39905 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.77□□□□□ -0.37
GDNFP39905 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.77□□□□□ -0.37
GDNFP39905 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GDNFP39905 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
GDNFP39905 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.77□□□□□ -0.37
GDNFP39905 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
GDNFP39905 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.77□□□□□ -0.37
GDNFP39905 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
GDNFP39905 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
GDNFP39905 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.77□□□□□ -0.37
GDNFP39905 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GDNFP39905 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
GDNFP39905 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
GDNFP39905 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.77□□□□□ -0.37
GDNFP39905 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GDNFP39905 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
GDNFP39905 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
GDNFP39905 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GDNFP39905 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GDNFP39905 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
GDNFP39905 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
GDNFP39905 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GDNFP39905 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GDNFP39905 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GDNFP39905 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GDNFP39905 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.77□□□□□ -0.37
GDNFP39905 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GDNFP39905 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GDNFP39905 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GDNFP39905 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GDNFP39905 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
GDNFP39905 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GDNFP39905 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
GDNFP39905 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.76□□□□□ -0.37
GDNFP39905 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GDNFP39905 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GDNFP39905 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
GDNFP39905 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
GDNFP39905 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.76□□□□□ -0.37
GDNFP39905 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
GDNFP39905 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GDNFP39905 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GDNFP39905 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms