Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CD4P01730 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD4P01730 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC15.98■□□□□ 0.15
CD4P01730 AL136172.1-201ENST00000598590 1394 ntBASIC15.98■□□□□ 0.15
CD4P01730 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC15.98■□□□□ 0.15
CD4P01730 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CD4P01730 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CD4P01730 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD4P01730 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD4P01730 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.98■□□□□ 0.15
CD4P01730 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.98■□□□□ 0.15
CD4P01730 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD4P01730 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD4P01730 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD4P01730 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.97■□□□□ 0.15
CD4P01730 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD4P01730 CICP23-201ENST00000605013 2741 ntBASIC15.97■□□□□ 0.15
CD4P01730 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD4P01730 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CD4P01730 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CD4P01730 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CD4P01730 AC139712.1-201ENST00000378256 1875 ntBASIC15.97■□□□□ 0.15
CD4P01730 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
CD4P01730 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.97■□□□□ 0.15
CD4P01730 AC092135.3-201ENST00000624151 1846 ntBASIC15.97■□□□□ 0.15
CD4P01730 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CD4P01730 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD4P01730 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CD4P01730 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CD4P01730 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CD4P01730 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CD4P01730 GCSHP3-201ENST00000431120 391 ntBASIC15.97■□□□□ 0.15
CD4P01730 RN7SL277P-201ENST00000481521 288 ntBASIC15.97■□□□□ 0.15
CD4P01730 RPS23-204ENST00000507980 836 ntTSL 2 BASIC15.97■□□□□ 0.15
CD4P01730 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC15.97■□□□□ 0.15
CD4P01730 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.97■□□□□ 0.15
CD4P01730 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.97■□□□□ 0.15
CD4P01730 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CD4P01730 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC15.97■□□□□ 0.15
CD4P01730 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
CD4P01730 AC073592.2-201ENST00000623062 780 ntBASIC15.97■□□□□ 0.15
CD4P01730 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC15.97■□□□□ 0.15
CD4P01730 AC002472.4-201ENST00000641915 272 ntBASIC15.97■□□□□ 0.15
CD4P01730 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CD4P01730 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD4P01730 AC018442.1-201ENST00000421439 2061 ntBASIC15.97■□□□□ 0.15
CD4P01730 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CD4P01730 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CD4P01730 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CD4P01730 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.97■□□□□ 0.15
CD4P01730 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD4P01730 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD4P01730 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD4P01730 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CD4P01730 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.97■□□□□ 0.15
CD4P01730 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC15.97■□□□□ 0.15
CD4P01730 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD4P01730 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.96■□□□□ 0.15
CD4P01730 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD4P01730 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD4P01730 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD4P01730 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD4P01730 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CD4P01730 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.96■□□□□ 0.15
CD4P01730 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD4P01730 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.96■□□□□ 0.15
CD4P01730 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CD4P01730 STK16-203ENST00000409516 895 ntTSL 2 BASIC15.96■□□□□ 0.15
CD4P01730 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CD4P01730 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.96■□□□□ 0.15
CD4P01730 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC15.96■□□□□ 0.15
CD4P01730 ERP29P1-201ENST00000442902 706 ntBASIC15.96■□□□□ 0.15
CD4P01730 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC15.96■□□□□ 0.15
CD4P01730 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC15.96■□□□□ 0.15
CD4P01730 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC15.96■□□□□ 0.15
CD4P01730 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC15.96■□□□□ 0.15
CD4P01730 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC15.96■□□□□ 0.15
CD4P01730 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CD4P01730 DNM1P51-201ENST00000558149 522 ntBASIC15.96■□□□□ 0.15
CD4P01730 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CD4P01730 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC15.96■□□□□ 0.15
CD4P01730 MIR4472-1-201ENST00000584349 80 ntBASIC15.96■□□□□ 0.15
CD4P01730 AC140113.1-201ENST00000603467 169 ntBASIC15.96■□□□□ 0.15
CD4P01730 NAMA-206ENST00000605377 509 ntTSL 5 BASIC15.96■□□□□ 0.15
CD4P01730 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC15.96■□□□□ 0.15
CD4P01730 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CD4P01730 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CD4P01730 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.96■□□□□ 0.15
CD4P01730 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD4P01730 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD4P01730 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CD4P01730 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.96■□□□□ 0.15
CD4P01730 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD4P01730 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
CD4P01730 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CD4P01730 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.96■□□□□ 0.14
CD4P01730 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
CD4P01730 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CD4P01730 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CD4P01730 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms