Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST3H2AQ7L7L0 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST3H2AQ7L7L0 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST3H2AQ7L7L0 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
HIST3H2AQ7L7L0 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST3H2AQ7L7L0 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST3H2AQ7L7L0 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST3H2AQ7L7L0 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST3H2AQ7L7L0 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
HIST3H2AQ7L7L0 CLUHP2-201ENST00000426660 1303 ntBASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 C2orf27AP3-201ENST00000434123 579 ntBASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 MIR5189-201ENST00000577370 114 ntBASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 AL354718.3-201ENST00000616414 581 ntBASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 AC138466.3-201ENST00000619983 221 ntBASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 AC132938.4-201ENST00000623835 848 ntBASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 CR382287.1-201ENST00000623954 586 ntBASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2AQ7L7L0 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 AL928921.2-201ENST00000641325 2442 ntBASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 POM121L8P-201ENST00000417732 1281 ntBASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 POM121L9P-203ENST00000441984 1285 ntBASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 AC007389.4-201ENST00000454674 793 ntBASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 GCOM2-201ENST00000509133 1104 ntBASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 AC138696.2-201ENST00000607376 223 ntBASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 MIR6074-201ENST00000612054 107 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms