Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN1P35523 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN1P35523 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC16.68■□□□□ 0.26
CLCN1P35523 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN1P35523 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN1P35523 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC16.68■□□□□ 0.26
CLCN1P35523 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN1P35523 C2-209ENST00000452323 1999 ntTSL 2 BASIC16.68■□□□□ 0.26
CLCN1P35523 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CLCN1P35523 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN1P35523 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
CLCN1P35523 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CLCN1P35523 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN1P35523 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN1P35523 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.67■□□□□ 0.26
CLCN1P35523 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN1P35523 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN1P35523 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN1P35523 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN1P35523 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC16.67■□□□□ 0.26
CLCN1P35523 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN1P35523 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN1P35523 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN1P35523 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN1P35523 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN1P35523 AL133267.1-201ENST00000398220 340 ntBASIC16.67■□□□□ 0.26
CLCN1P35523 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.67■□□□□ 0.26
CLCN1P35523 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN1P35523 AC241585.1-201ENST00000433527 519 ntBASIC16.67■□□□□ 0.26
CLCN1P35523 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.67■□□□□ 0.26
CLCN1P35523 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.67■□□□□ 0.26
CLCN1P35523 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.67■□□□□ 0.26
CLCN1P35523 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.67■□□□□ 0.26
CLCN1P35523 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.67■□□□□ 0.26
CLCN1P35523 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.67■□□□□ 0.26
CLCN1P35523 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.67■□□□□ 0.26
CLCN1P35523 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.67■□□□□ 0.26
CLCN1P35523 AL390955.2-201ENST00000603032 514 ntBASIC16.67■□□□□ 0.26
CLCN1P35523 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.67■□□□□ 0.26
CLCN1P35523 AC093512.1-201ENST00000617969 520 ntBASIC16.67■□□□□ 0.26
CLCN1P35523 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN1P35523 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN1P35523 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN1P35523 AC026992.2-203ENST00000563004 2419 ntBASIC16.67■□□□□ 0.26
CLCN1P35523 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC16.67■□□□□ 0.26
CLCN1P35523 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC16.67■□□□□ 0.26
CLCN1P35523 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN1P35523 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC16.67■□□□□ 0.26
CLCN1P35523 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN1P35523 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.67■□□□□ 0.26
CLCN1P35523 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CLCN1P35523 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN1P35523 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN1P35523 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.66■□□□□ 0.26
CLCN1P35523 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN1P35523 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN1P35523 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.66■□□□□ 0.26
CLCN1P35523 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN1P35523 STK25-235ENST00000543554 2556 ntTSL 2 BASIC16.66■□□□□ 0.26
CLCN1P35523 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CLCN1P35523 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN1P35523 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN1P35523 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN1P35523 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN1P35523 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN1P35523 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.66■□□□□ 0.26
CLCN1P35523 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.66■□□□□ 0.26
CLCN1P35523 AC114501.2-201ENST00000439631 535 ntBASIC16.66■□□□□ 0.26
CLCN1P35523 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CLCN1P35523 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC16.66■□□□□ 0.26
CLCN1P35523 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CLCN1P35523 PCDHB19P-202ENST00000625133 2914 ntBASIC16.66■□□□□ 0.26
CLCN1P35523 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.66■□□□□ 0.26
CLCN1P35523 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN1P35523 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLCN1P35523 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN1P35523 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CLCN1P35523 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.66■□□□□ 0.26
CLCN1P35523 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN1P35523 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN1P35523 CARS-214ENST00000529772 2637 ntTSL 2 BASIC16.66■□□□□ 0.26
CLCN1P35523 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN1P35523 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC16.65■□□□□ 0.26
CLCN1P35523 AL121723.1-201ENST00000445194 1519 ntBASIC16.65■□□□□ 0.26
CLCN1P35523 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN1P35523 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN1P35523 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CLCN1P35523 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC16.65■□□□□ 0.26
CLCN1P35523 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN1P35523 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN1P35523 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN1P35523 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC16.65■□□□□ 0.26
CLCN1P35523 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN1P35523 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN1P35523 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN1P35523 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN1P35523 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN1P35523 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN1P35523 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN1P35523 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms