Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.77□□□□□ -0.05
VCLP18206 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.77□□□□□ -0.05
VCLP18206 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VCLP18206 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VCLP18206 MESTP3-201ENST00000503460 968 ntBASIC14.77□□□□□ -0.05
VCLP18206 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.77□□□□□ -0.05
VCLP18206 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.77□□□□□ -0.05
VCLP18206 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.77□□□□□ -0.05
VCLP18206 MIR4259-201ENST00000584466 101 ntBASIC14.77□□□□□ -0.05
VCLP18206 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.77□□□□□ -0.05
VCLP18206 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
VCLP18206 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VCLP18206 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.77□□□□□ -0.05
VCLP18206 MST1P2-201ENST00000457982 2291 ntBASIC14.77□□□□□ -0.05
VCLP18206 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VCLP18206 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VCLP18206 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
VCLP18206 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
VCLP18206 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VCLP18206 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
VCLP18206 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VCLP18206 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.77□□□□□ -0.05
VCLP18206 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.77□□□□□ -0.05
VCLP18206 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.77□□□□□ -0.05
VCLP18206 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VCLP18206 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.77□□□□□ -0.05
VCLP18206 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
VCLP18206 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
VCLP18206 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.76□□□□□ -0.05
VCLP18206 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.76□□□□□ -0.05
VCLP18206 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
VCLP18206 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
VCLP18206 CLUHP2-201ENST00000426660 1303 ntBASIC14.76□□□□□ -0.05
VCLP18206 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.76□□□□□ -0.05
VCLP18206 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
VCLP18206 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.76□□□□□ -0.05
VCLP18206 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.76□□□□□ -0.05
VCLP18206 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.76□□□□□ -0.05
VCLP18206 TLE1P1-201ENST00000422965 589 ntBASIC14.76□□□□□ -0.05
VCLP18206 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 AC007969.1-201ENST00000433675 447 ntBASIC14.76□□□□□ -0.05
VCLP18206 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
VCLP18206 HOMER2P2-201ENST00000451621 847 ntBASIC14.76□□□□□ -0.05
VCLP18206 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.76□□□□□ -0.05
VCLP18206 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.76□□□□□ -0.05
VCLP18206 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.76□□□□□ -0.05
VCLP18206 COX5BP1-201ENST00000507622 393 ntBASIC14.76□□□□□ -0.05
VCLP18206 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.76□□□□□ -0.05
VCLP18206 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.76□□□□□ -0.05
VCLP18206 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.76□□□□□ -0.05
VCLP18206 DUX4L45-201ENST00000566406 1057 ntBASIC14.76□□□□□ -0.05
VCLP18206 OR10B1P-201ENST00000601666 907 ntBASIC14.76□□□□□ -0.05
VCLP18206 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.76□□□□□ -0.05
VCLP18206 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
VCLP18206 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
VCLP18206 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.76□□□□□ -0.05
VCLP18206 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.76□□□□□ -0.05
VCLP18206 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.76□□□□□ -0.05
VCLP18206 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
VCLP18206 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.76□□□□□ -0.05
VCLP18206 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
VCLP18206 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VCLP18206 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.76□□□□□ -0.05
VCLP18206 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms