Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.64□□□□□ -0.23
CCL4P13236 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL4P13236 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.64□□□□□ -0.23
CCL4P13236 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL4P13236 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC13.64□□□□□ -0.23
CCL4P13236 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC13.64□□□□□ -0.23
CCL4P13236 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CCL4P13236 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL4P13236 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CCL4P13236 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL4P13236 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CCL4P13236 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CCL4P13236 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL4P13236 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CCL4P13236 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL4P13236 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL4P13236 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL4P13236 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL4P13236 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CCL4P13236 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL4P13236 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL4P13236 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL4P13236 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL4P13236 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CCL4P13236 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL4P13236 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL4P13236 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL4P13236 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL4P13236 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL4P13236 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL4P13236 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CCL4P13236 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CCL4P13236 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL4P13236 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC13.63□□□□□ -0.23
CCL4P13236 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC13.63□□□□□ -0.23
CCL4P13236 RN7SKP109-201ENST00000410592 316 ntBASIC13.63□□□□□ -0.23
CCL4P13236 KRT18P66-201ENST00000452970 1269 ntBASIC13.63□□□□□ -0.23
CCL4P13236 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC13.63□□□□□ -0.23
CCL4P13236 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC13.63□□□□□ -0.23
CCL4P13236 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC13.63□□□□□ -0.23
CCL4P13236 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL4P13236 SORD2P-201ENST00000558556 1069 ntBASIC13.63□□□□□ -0.23
CCL4P13236 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL4P13236 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC13.63□□□□□ -0.23
CCL4P13236 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 DBP-202ENST00000593500 712 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL4P13236 AC009145.4-201ENST00000625119 1294 ntBASIC13.63□□□□□ -0.23
CCL4P13236 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CCL4P13236 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
CCL4P13236 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
CCL4P13236 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 AL354702.1-201ENST00000442006 1960 ntBASIC13.63□□□□□ -0.23
CCL4P13236 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 LINC01815-202ENST00000641468 1409 ntBASIC13.63□□□□□ -0.23
CCL4P13236 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 TEKT4P2-202ENST00000559466 1312 ntBASIC13.63□□□□□ -0.23
CCL4P13236 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.63□□□□□ -0.23
CCL4P13236 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL4P13236 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.63□□□□□ -0.23
CCL4P13236 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CCL4P13236 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL4P13236 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL4P13236 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL4P13236 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL4P13236 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL4P13236 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL4P13236 AC215219.1-201ENST00000400706 1817 ntBASIC13.62□□□□□ -0.23
CCL4P13236 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL4P13236 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL4P13236 PCDHA3-202ENST00000532566 4594 ntBASIC13.62□□□□□ -0.23
CCL4P13236 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL4P13236 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL4P13236 FTX-216ENST00000638985 1367 ntTSL 5 BASIC13.62□□□□□ -0.23
CCL4P13236 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL4P13236 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCL4P13236 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CCL4P13236 AL591122.2-201ENST00000624125 1853 ntBASIC13.62□□□□□ -0.23
CCL4P13236 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms