Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H2ABP04908 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST1H2ABP04908 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H2ABP04908 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
HIST1H2ABP04908 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H2ABP04908 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H2ABP04908 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H2ABP04908 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H2ABP04908 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
HIST1H2ABP04908 CLUHP2-201ENST00000426660 1303 ntBASIC13.39□□□□□ -0.27
HIST1H2ABP04908 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 C2orf27AP3-201ENST00000434123 579 ntBASIC13.39□□□□□ -0.27
HIST1H2ABP04908 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 MIR5189-201ENST00000577370 114 ntBASIC13.39□□□□□ -0.27
HIST1H2ABP04908 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 AL354718.3-201ENST00000616414 581 ntBASIC13.39□□□□□ -0.27
HIST1H2ABP04908 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 AC138466.3-201ENST00000619983 221 ntBASIC13.39□□□□□ -0.27
HIST1H2ABP04908 AC132938.4-201ENST00000623835 848 ntBASIC13.39□□□□□ -0.27
HIST1H2ABP04908 CR382287.1-201ENST00000623954 586 ntBASIC13.39□□□□□ -0.27
HIST1H2ABP04908 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H2ABP04908 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 AL928921.2-201ENST00000641325 2442 ntBASIC13.38□□□□□ -0.27
HIST1H2ABP04908 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 POM121L8P-201ENST00000417732 1281 ntBASIC13.38□□□□□ -0.27
HIST1H2ABP04908 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 POM121L9P-203ENST00000441984 1285 ntBASIC13.38□□□□□ -0.27
HIST1H2ABP04908 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 AC007389.4-201ENST00000454674 793 ntBASIC13.38□□□□□ -0.27
HIST1H2ABP04908 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 GCOM2-201ENST00000509133 1104 ntBASIC13.38□□□□□ -0.27
HIST1H2ABP04908 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST1H2ABP04908 AC138696.2-201ENST00000607376 223 ntBASIC13.38□□□□□ -0.27
HIST1H2ABP04908 MIR6074-201ENST00000612054 107 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms