Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 MIR326-201ENST00000362220 95 ntBASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 POM121L8P-201ENST00000417732 1281 ntBASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 POM121L9P-203ENST00000441984 1285 ntBASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 AC026434.2-201ENST00000506094 1078 ntBASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 MIR4525-201ENST00000580000 75 ntBASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCGF1Q9BSM1 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 AL928921.2-201ENST00000641325 2442 ntBASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PCGF1Q9BSM1 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms