Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC18.6■□□□□ 0.57
ABCA3Q99758 OR52V1P-201ENST00000515557 898 ntBASIC18.6■□□□□ 0.57
ABCA3Q99758 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC18.6■□□□□ 0.57
ABCA3Q99758 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ABCA3Q99758 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ABCA3Q99758 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC18.6■□□□□ 0.57
ABCA3Q99758 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC18.6■□□□□ 0.57
ABCA3Q99758 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
ABCA3Q99758 AC018529.2-202ENST00000611482 3087 ntBASIC18.6■□□□□ 0.57
ABCA3Q99758 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC18.6■□□□□ 0.57
ABCA3Q99758 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC18.6■□□□□ 0.57
ABCA3Q99758 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ABCA3Q99758 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ABCA3Q99758 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC18.59■□□□□ 0.57
ABCA3Q99758 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
ABCA3Q99758 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ABCA3Q99758 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC18.59■□□□□ 0.57
ABCA3Q99758 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.59■□□□□ 0.57
ABCA3Q99758 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.59■□□□□ 0.57
ABCA3Q99758 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ABCA3Q99758 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
ABCA3Q99758 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ABCA3Q99758 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ABCA3Q99758 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ABCA3Q99758 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
ABCA3Q99758 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ABCA3Q99758 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ABCA3Q99758 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ABCA3Q99758 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ABCA3Q99758 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ABCA3Q99758 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ABCA3Q99758 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC18.59■□□□□ 0.57
ABCA3Q99758 KRT18P15-201ENST00000458108 1291 ntBASIC18.59■□□□□ 0.57
ABCA3Q99758 RNA5SP288-201ENST00000516075 93 ntBASIC18.59■□□□□ 0.57
ABCA3Q99758 AC010202.1-201ENST00000551181 405 ntBASIC18.59■□□□□ 0.57
ABCA3Q99758 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ABCA3Q99758 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ABCA3Q99758 MIR4326-201ENST00000582203 59 ntBASIC18.59■□□□□ 0.57
ABCA3Q99758 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC18.59■□□□□ 0.57
ABCA3Q99758 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC18.59■□□□□ 0.57
ABCA3Q99758 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC18.59■□□□□ 0.57
ABCA3Q99758 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.59■□□□□ 0.57
ABCA3Q99758 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC18.59■□□□□ 0.57
ABCA3Q99758 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ABCA3Q99758 RN7SL832P-201ENST00000607781 1756 ntBASIC18.59■□□□□ 0.57
ABCA3Q99758 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ABCA3Q99758 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ABCA3Q99758 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ABCA3Q99758 AC090505.1-201ENST00000430515 1834 ntBASIC18.58■□□□□ 0.57
ABCA3Q99758 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
ABCA3Q99758 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ABCA3Q99758 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC18.58■□□□□ 0.57
ABCA3Q99758 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ABCA3Q99758 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ABCA3Q99758 OR7E12P-201ENST00000344740 973 ntBASIC18.58■□□□□ 0.57
ABCA3Q99758 MIR339-201ENST00000362153 94 ntBASIC18.58■□□□□ 0.57
ABCA3Q99758 RBP4-203ENST00000371469 814 ntTSL 5 BASIC18.58■□□□□ 0.57
ABCA3Q99758 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC18.58■□□□□ 0.57
ABCA3Q99758 TPT1P11-201ENST00000458482 498 ntBASIC18.58■□□□□ 0.57
ABCA3Q99758 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC18.58■□□□□ 0.57
ABCA3Q99758 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC18.58■□□□□ 0.57
ABCA3Q99758 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
ABCA3Q99758 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
ABCA3Q99758 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC18.58■□□□□ 0.56
ABCA3Q99758 STK16-202ENST00000409260 1493 ntTSL 5 BASIC18.58■□□□□ 0.56
ABCA3Q99758 AC024075.2-201ENST00000598112 1473 ntBASIC18.58■□□□□ 0.56
ABCA3Q99758 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ABCA3Q99758 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC18.58■□□□□ 0.56
ABCA3Q99758 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ABCA3Q99758 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
ABCA3Q99758 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC18.58■□□□□ 0.56
ABCA3Q99758 AC013268.4-201ENST00000637413 2228 ntBASIC18.58■□□□□ 0.56
ABCA3Q99758 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
ABCA3Q99758 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
ABCA3Q99758 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
ABCA3Q99758 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.58■□□□□ 0.56
ABCA3Q99758 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ABCA3Q99758 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ABCA3Q99758 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC18.57■□□□□ 0.56
ABCA3Q99758 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ABCA3Q99758 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ABCA3Q99758 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ABCA3Q99758 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC18.57■□□□□ 0.56
ABCA3Q99758 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC18.57■□□□□ 0.56
ABCA3Q99758 KRT19P4-201ENST00000443208 943 ntBASIC18.57■□□□□ 0.56
ABCA3Q99758 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ABCA3Q99758 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC18.57■□□□□ 0.56
ABCA3Q99758 METTL7AP1-201ENST00000547343 496 ntBASIC18.57■□□□□ 0.56
ABCA3Q99758 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC18.57■□□□□ 0.56
ABCA3Q99758 CLPP-205ENST00000596605 646 ntTSL 2 BASIC18.57■□□□□ 0.56
ABCA3Q99758 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ABCA3Q99758 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
ABCA3Q99758 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ABCA3Q99758 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ABCA3Q99758 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ABCA3Q99758 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ABCA3Q99758 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ABCA3Q99758 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ABCA3Q99758 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ABCA3Q99758 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms