Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE1AP54750 AL583810.1-201ENST00000553344 1045 ntBASIC17.76■□□□□ 0.43
PDE1AP54750 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
PDE1AP54750 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE1AP54750 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.76■□□□□ 0.43
PDE1AP54750 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.76■□□□□ 0.43
PDE1AP54750 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.76■□□□□ 0.43
PDE1AP54750 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PDE1AP54750 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE1AP54750 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE1AP54750 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE1AP54750 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
PDE1AP54750 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
PDE1AP54750 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE1AP54750 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE1AP54750 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PDE1AP54750 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PDE1AP54750 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE1AP54750 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PDE1AP54750 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDE1AP54750 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE1AP54750 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC17.75■□□□□ 0.43
PDE1AP54750 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PDE1AP54750 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE1AP54750 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDE1AP54750 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE1AP54750 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE1AP54750 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE1AP54750 MBLAC2-202ENST00000514906 1936 ntBASIC17.75■□□□□ 0.43
PDE1AP54750 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE1AP54750 AC010327.5-201ENST00000586923 3061 ntBASIC17.75■□□□□ 0.43
PDE1AP54750 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE1AP54750 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDE1AP54750 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDE1AP54750 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.75■□□□□ 0.43
PDE1AP54750 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.75■□□□□ 0.43
PDE1AP54750 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.75■□□□□ 0.43
PDE1AP54750 MTX1P1-201ENST00000440904 838 ntBASIC17.75■□□□□ 0.43
PDE1AP54750 ATP5G2P4-201ENST00000442175 420 ntBASIC17.75■□□□□ 0.43
PDE1AP54750 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDE1AP54750 RPL13AP20-201ENST00000459725 609 ntBASIC17.75■□□□□ 0.43
PDE1AP54750 TMEM198B-204ENST00000484016 896 ntBASIC17.75■□□□□ 0.43
PDE1AP54750 FAM86HP-204ENST00000513466 959 ntBASIC17.75■□□□□ 0.43
PDE1AP54750 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.75■□□□□ 0.43
PDE1AP54750 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.75■□□□□ 0.43
PDE1AP54750 AC009884.2-201ENST00000603110 324 ntBASIC17.75■□□□□ 0.43
PDE1AP54750 AL096828.3-201ENST00000615354 462 ntBASIC17.75■□□□□ 0.43
PDE1AP54750 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC17.75■□□□□ 0.43
PDE1AP54750 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PDE1AP54750 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC17.75■□□□□ 0.43
PDE1AP54750 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE1AP54750 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PDE1AP54750 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE1AP54750 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDE1AP54750 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
PDE1AP54750 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE1AP54750 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
PDE1AP54750 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE1AP54750 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE1AP54750 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDE1AP54750 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDE1AP54750 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE1AP54750 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE1AP54750 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC17.74■□□□□ 0.43
PDE1AP54750 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE1AP54750 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDE1AP54750 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC17.74■□□□□ 0.43
PDE1AP54750 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE1AP54750 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC17.74■□□□□ 0.43
PDE1AP54750 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDE1AP54750 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.74■□□□□ 0.43
PDE1AP54750 Z93015.1-201ENST00000451718 390 ntBASIC17.74■□□□□ 0.43
PDE1AP54750 AC006122.1-201ENST00000493323 440 ntBASIC17.74■□□□□ 0.43
PDE1AP54750 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.74■□□□□ 0.43
PDE1AP54750 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PDE1AP54750 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDE1AP54750 AC003686.1-201ENST00000550956 1034 ntBASIC17.74■□□□□ 0.43
PDE1AP54750 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.74■□□□□ 0.43
PDE1AP54750 RN7SL560P-201ENST00000577943 264 ntBASIC17.74■□□□□ 0.43
PDE1AP54750 AC005324.6-201ENST00000587972 613 ntBASIC17.74■□□□□ 0.43
PDE1AP54750 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE1AP54750 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.74■□□□□ 0.43
PDE1AP54750 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.74■□□□□ 0.43
PDE1AP54750 AC239800.4-201ENST00000603712 296 ntBASIC17.74■□□□□ 0.43
PDE1AP54750 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.74■□□□□ 0.43
PDE1AP54750 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC17.74■□□□□ 0.43
PDE1AP54750 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PDE1AP54750 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC17.74■□□□□ 0.43
PDE1AP54750 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE1AP54750 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PDE1AP54750 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDE1AP54750 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PDE1AP54750 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC17.74■□□□□ 0.43
PDE1AP54750 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE1AP54750 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE1AP54750 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC17.74■□□□□ 0.43
PDE1AP54750 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE1AP54750 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDE1AP54750 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE1AP54750 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms