Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
GABRA4P48169 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GABRA4P48169 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GABRA4P48169 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
GABRA4P48169 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.77□□□□□ -0.2
GABRA4P48169 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
GABRA4P48169 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
GABRA4P48169 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.77□□□□□ -0.2
GABRA4P48169 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
GABRA4P48169 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GABRA4P48169 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GABRA4P48169 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
GABRA4P48169 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC13.77□□□□□ -0.21
GABRA4P48169 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.77□□□□□ -0.21
GABRA4P48169 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GABRA4P48169 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GABRA4P48169 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
GABRA4P48169 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.77□□□□□ -0.21
GABRA4P48169 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GABRA4P48169 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.77□□□□□ -0.21
GABRA4P48169 AC090505.1-201ENST00000430515 1834 ntBASIC13.77□□□□□ -0.21
GABRA4P48169 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.77□□□□□ -0.21
GABRA4P48169 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GABRA4P48169 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.77□□□□□ -0.21
GABRA4P48169 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GABRA4P48169 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.77□□□□□ -0.21
GABRA4P48169 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.77□□□□□ -0.21
GABRA4P48169 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.77□□□□□ -0.21
GABRA4P48169 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
GABRA4P48169 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GABRA4P48169 RTN3P1-201ENST00000536295 711 ntBASIC13.77□□□□□ -0.21
GABRA4P48169 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
GABRA4P48169 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.77□□□□□ -0.21
GABRA4P48169 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.77□□□□□ -0.21
GABRA4P48169 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.77□□□□□ -0.21
GABRA4P48169 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.77□□□□□ -0.21
GABRA4P48169 AC026803.1-201ENST00000569130 274 ntBASIC13.77□□□□□ -0.21
GABRA4P48169 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.77□□□□□ -0.21
GABRA4P48169 AC015802.1-201ENST00000588104 1449 ntBASIC13.77□□□□□ -0.21
GABRA4P48169 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.77□□□□□ -0.21
GABRA4P48169 AL591471.1-201ENST00000621855 229 ntBASIC13.77□□□□□ -0.21
GABRA4P48169 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
GABRA4P48169 AC011498.7-201ENST00000624986 2027 ntBASIC13.77□□□□□ -0.21
GABRA4P48169 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.77□□□□□ -0.21
GABRA4P48169 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
GABRA4P48169 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
GABRA4P48169 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GABRA4P48169 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GABRA4P48169 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GABRA4P48169 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GABRA4P48169 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GABRA4P48169 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
GABRA4P48169 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.76□□□□□ -0.21
GABRA4P48169 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GABRA4P48169 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
GABRA4P48169 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GABRA4P48169 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GABRA4P48169 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GABRA4P48169 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GABRA4P48169 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GABRA4P48169 AC015909.3-201ENST00000572855 1794 ntBASIC13.76□□□□□ -0.21
GABRA4P48169 RN7SL832P-201ENST00000607781 1756 ntBASIC13.76□□□□□ -0.21
GABRA4P48169 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
GABRA4P48169 AC099063.4-201ENST00000641099 1602 ntBASIC13.76□□□□□ -0.21
GABRA4P48169 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
GABRA4P48169 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
GABRA4P48169 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GABRA4P48169 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GABRA4P48169 LAP3P2-201ENST00000454686 1454 ntBASIC13.76□□□□□ -0.21
GABRA4P48169 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.76□□□□□ -0.21
GABRA4P48169 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GABRA4P48169 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GABRA4P48169 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
GABRA4P48169 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GABRA4P48169 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.76□□□□□ -0.21
GABRA4P48169 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GABRA4P48169 ELK2AP-201ENST00000392510 1007 ntBASIC13.76□□□□□ -0.21
GABRA4P48169 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.76□□□□□ -0.21
GABRA4P48169 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.76□□□□□ -0.21
GABRA4P48169 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC13.76□□□□□ -0.21
GABRA4P48169 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.76□□□□□ -0.21
GABRA4P48169 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC13.76□□□□□ -0.21
GABRA4P48169 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.76□□□□□ -0.21
GABRA4P48169 RN7SL258P-201ENST00000478664 300 ntBASIC13.76□□□□□ -0.21
GABRA4P48169 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GABRA4P48169 PHBP15-201ENST00000574228 665 ntBASIC13.76□□□□□ -0.21
GABRA4P48169 MIR3907-201ENST00000579424 151 ntBASIC13.76□□□□□ -0.21
GABRA4P48169 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC13.76□□□□□ -0.21
GABRA4P48169 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.76□□□□□ -0.21
GABRA4P48169 AL109837.1-201ENST00000603272 613 ntBASIC13.76□□□□□ -0.21
GABRA4P48169 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GABRA4P48169 AC021016.3-201ENST00000608367 477 ntBASIC13.76□□□□□ -0.21
GABRA4P48169 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.76□□□□□ -0.21
GABRA4P48169 AC006453.1-201ENST00000636037 1257 ntBASIC13.76□□□□□ -0.21
GABRA4P48169 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GABRA4P48169 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GABRA4P48169 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.76□□□□□ -0.21
GABRA4P48169 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.76□□□□□ -0.21
GABRA4P48169 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
GABRA4P48169 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms