Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CAPN3P20807 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CAPN3P20807 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.13□□□□□ -0.15
CAPN3P20807 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CAPN3P20807 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CAPN3P20807 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CAPN3P20807 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.13□□□□□ -0.15
CAPN3P20807 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.13□□□□□ -0.15
CAPN3P20807 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CAPN3P20807 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CAPN3P20807 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.13□□□□□ -0.15
CAPN3P20807 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.13□□□□□ -0.15
CAPN3P20807 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CAPN3P20807 AC073548.1-201ENST00000624088 1882 ntBASIC14.13□□□□□ -0.15
CAPN3P20807 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.13□□□□□ -0.15
CAPN3P20807 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CAPN3P20807 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CAPN3P20807 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CAPN3P20807 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CAPN3P20807 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.13□□□□□ -0.15
CAPN3P20807 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.13□□□□□ -0.15
CAPN3P20807 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CAPN3P20807 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CAPN3P20807 KLF2P2-201ENST00000416807 1039 ntBASIC14.13□□□□□ -0.15
CAPN3P20807 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.13□□□□□ -0.15
CAPN3P20807 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.13□□□□□ -0.15
CAPN3P20807 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CAPN3P20807 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CAPN3P20807 MYCLP2-201ENST00000449268 967 ntBASIC14.13□□□□□ -0.15
CAPN3P20807 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CAPN3P20807 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CAPN3P20807 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.13□□□□□ -0.15
CAPN3P20807 AP001582.1-201ENST00000525856 295 ntBASIC14.13□□□□□ -0.15
CAPN3P20807 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.13□□□□□ -0.15
CAPN3P20807 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.13□□□□□ -0.15
CAPN3P20807 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.13□□□□□ -0.15
CAPN3P20807 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.13□□□□□ -0.15
CAPN3P20807 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.13□□□□□ -0.15
CAPN3P20807 RN7SL219P-201ENST00000582872 296 ntBASIC14.13□□□□□ -0.15
CAPN3P20807 AC103810.3-201ENST00000583567 96 ntBASIC14.13□□□□□ -0.15
CAPN3P20807 MIR4259-201ENST00000584466 101 ntBASIC14.13□□□□□ -0.15
CAPN3P20807 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.13□□□□□ -0.15
CAPN3P20807 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.13□□□□□ -0.15
CAPN3P20807 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CAPN3P20807 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.13□□□□□ -0.15
CAPN3P20807 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.13□□□□□ -0.15
CAPN3P20807 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CAPN3P20807 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.13□□□□□ -0.15
CAPN3P20807 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.13□□□□□ -0.15
CAPN3P20807 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.13□□□□□ -0.15
CAPN3P20807 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CAPN3P20807 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.13□□□□□ -0.15
CAPN3P20807 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.13□□□□□ -0.15
CAPN3P20807 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.13□□□□□ -0.15
CAPN3P20807 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CAPN3P20807 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CAPN3P20807 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CAPN3P20807 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CAPN3P20807 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.12□□□□□ -0.15
CAPN3P20807 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CAPN3P20807 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CAPN3P20807 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CAPN3P20807 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CAPN3P20807 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CAPN3P20807 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.12□□□□□ -0.15
CAPN3P20807 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CAPN3P20807 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.12□□□□□ -0.15
CAPN3P20807 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CAPN3P20807 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CAPN3P20807 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CAPN3P20807 AL122018.1-201ENST00000446607 2310 ntBASIC14.12□□□□□ -0.15
CAPN3P20807 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CAPN3P20807 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CAPN3P20807 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CAPN3P20807 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CAPN3P20807 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CAPN3P20807 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.12□□□□□ -0.15
CAPN3P20807 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CAPN3P20807 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CAPN3P20807 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.12□□□□□ -0.15
CAPN3P20807 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CAPN3P20807 AC092506.1-202ENST00000401022 528 ntBASIC14.12□□□□□ -0.15
CAPN3P20807 AC004945.1-201ENST00000416738 983 ntBASIC14.12□□□□□ -0.15
CAPN3P20807 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.12□□□□□ -0.15
CAPN3P20807 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CAPN3P20807 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.12□□□□□ -0.15
CAPN3P20807 TPRX2P-201ENST00000535362 881 ntBASIC14.12□□□□□ -0.15
CAPN3P20807 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.12□□□□□ -0.15
CAPN3P20807 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.12□□□□□ -0.15
CAPN3P20807 WASH4P-201ENST00000564273 1246 ntBASIC14.12□□□□□ -0.15
CAPN3P20807 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CAPN3P20807 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.12□□□□□ -0.15
CAPN3P20807 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CAPN3P20807 AL603764.1-201ENST00000636452 321 ntBASIC14.12□□□□□ -0.15
CAPN3P20807 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CAPN3P20807 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CAPN3P20807 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CAPN3P20807 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CAPN3P20807 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CAPN3P20807 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms