Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 KRT8P35-201ENST00000483942 1338 ntBASIC12.55□□□□□ -0.4
TMEM235A6NFC5 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 AC083964.2-201ENST00000623988 2396 ntBASIC12.54□□□□□ -0.4
TMEM235A6NFC5 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 SPDYE18-201ENST00000510091 1050 ntBASIC12.54□□□□□ -0.4
TMEM235A6NFC5 AC109322.1-201ENST00000524499 1264 ntBASIC12.54□□□□□ -0.4
TMEM235A6NFC5 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 AL671883.3-201ENST00000603274 991 ntBASIC12.54□□□□□ -0.4
TMEM235A6NFC5 AC093813.1-201ENST00000605066 256 ntBASIC12.54□□□□□ -0.4
TMEM235A6NFC5 AL662799.1-202ENST00000614205 422 ntBASIC12.54□□□□□ -0.4
TMEM235A6NFC5 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.54□□□□□ -0.4
TMEM235A6NFC5 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms