Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 AL161932.2-201ENST00000435436 679 ntBASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 FTLP10-202ENST00000505798 471 ntBASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 AL391280.1-201ENST00000506969 1062 ntBASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 AC027237.1-201ENST00000560942 655 ntBASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 AL096865.1-201ENST00000606796 927 ntBASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 AC104506.1-201ENST00000609247 429 ntBASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 KRT8P28-201ENST00000433288 1390 ntBASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 AP000593.2-201ENST00000542775 1433 ntBASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 AC009093.2-202ENST00000620513 2079 ntBASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 MIR3197-201ENST00000582241 73 ntBASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 ENPP7P14-201ENST00000621765 1040 ntBASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 AL391825.1-201ENST00000457671 1364 ntBASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.67□□□□□ -0.06
SLC44A1Q8WWI5 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
SLC44A1Q8WWI5 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms