Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 TERF1P1-201ENST00000311003 1181 ntBASIC12.84□□□□□ -0.35
DEFA3P59666 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA3P59666 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
DEFA3P59666 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
DEFA3P59666 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.84□□□□□ -0.35
DEFA3P59666 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC12.84□□□□□ -0.35
DEFA3P59666 SCARNA2-201ENST00000458748 420 ntBASIC12.84□□□□□ -0.35
DEFA3P59666 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC12.84□□□□□ -0.35
DEFA3P59666 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
DEFA3P59666 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.84□□□□□ -0.35
DEFA3P59666 SAMD11P1-201ENST00000571429 661 ntBASIC12.84□□□□□ -0.35
DEFA3P59666 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.84□□□□□ -0.35
DEFA3P59666 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.84□□□□□ -0.35
DEFA3P59666 MIR1199-201ENST00000621445 119 ntBASIC12.84□□□□□ -0.35
DEFA3P59666 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
DEFA3P59666 AC018445.4-201ENST00000624066 2291 ntBASIC12.84□□□□□ -0.35
DEFA3P59666 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
DEFA3P59666 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
DEFA3P59666 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA3P59666 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.84□□□□□ -0.35
DEFA3P59666 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA3P59666 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC12.84□□□□□ -0.35
DEFA3P59666 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA3P59666 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
DEFA3P59666 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA3P59666 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA3P59666 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA3P59666 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC12.84□□□□□ -0.35
DEFA3P59666 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.84□□□□□ -0.35
DEFA3P59666 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
DEFA3P59666 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.84□□□□□ -0.35
DEFA3P59666 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA3P59666 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.84□□□□□ -0.35
DEFA3P59666 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA3P59666 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA3P59666 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.84□□□□□ -0.35
DEFA3P59666 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
DEFA3P59666 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA3P59666 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA3P59666 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC12.83□□□□□ -0.35
DEFA3P59666 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
DEFA3P59666 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
DEFA3P59666 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
DEFA3P59666 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.83□□□□□ -0.35
DEFA3P59666 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.83□□□□□ -0.35
DEFA3P59666 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
DEFA3P59666 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
DEFA3P59666 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.83□□□□□ -0.36
DEFA3P59666 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA3P59666 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
DEFA3P59666 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA3P59666 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA3P59666 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA3P59666 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA3P59666 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA3P59666 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA3P59666 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA3P59666 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA3P59666 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
DEFA3P59666 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA3P59666 TSPY20P-201ENST00000450910 630 ntBASIC12.83□□□□□ -0.36
DEFA3P59666 AC105233.2-201ENST00000523697 349 ntBASIC12.83□□□□□ -0.36
DEFA3P59666 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
DEFA3P59666 AF228730.5-201ENST00000530288 346 ntBASIC12.83□□□□□ -0.36
DEFA3P59666 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.83□□□□□ -0.36
DEFA3P59666 ETFA-208ENST00000559602 792 ntTSL 3 BASIC12.83□□□□□ -0.36
DEFA3P59666 AC012615.1-201ENST00000565797 1299 ntBASIC12.83□□□□□ -0.36
DEFA3P59666 AP002414.4-201ENST00000589764 1148 ntBASIC12.83□□□□□ -0.36
DEFA3P59666 PI4KAP2-201ENST00000360806 2080 ntBASIC12.83□□□□□ -0.36
DEFA3P59666 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA3P59666 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.83□□□□□ -0.36
DEFA3P59666 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC12.83□□□□□ -0.36
DEFA3P59666 AL645937.6-201ENST00000641122 3727 ntBASIC12.83□□□□□ -0.36
DEFA3P59666 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC12.83□□□□□ -0.36
DEFA3P59666 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.83□□□□□ -0.36
DEFA3P59666 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.83□□□□□ -0.36
DEFA3P59666 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA3P59666 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
DEFA3P59666 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA3P59666 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.83□□□□□ -0.36
DEFA3P59666 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA3P59666 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
DEFA3P59666 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA3P59666 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.83□□□□□ -0.36
DEFA3P59666 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA3P59666 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA3P59666 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
DEFA3P59666 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA3P59666 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
DEFA3P59666 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA3P59666 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.82□□□□□ -0.36
DEFA3P59666 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA3P59666 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA3P59666 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA3P59666 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.82□□□□□ -0.36
DEFA3P59666 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC12.82□□□□□ -0.36
DEFA3P59666 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA3P59666 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA3P59666 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA3P59666 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms