Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIMK1P53667 FAM90A21P-201ENST00000510875 1396 ntBASIC14.39□□□□□ -0.11
LIMK1P53667 FAM90A15P-201ENST00000514465 1395 ntBASIC14.39□□□□□ -0.11
LIMK1P53667 FAM90A6P-201ENST00000515148 1394 ntBASIC14.39□□□□□ -0.11
LIMK1P53667 FAM90A16P-201ENST00000526662 1395 ntBASIC14.39□□□□□ -0.11
LIMK1P53667 FAM90A9P-201ENST00000527940 1395 ntBASIC14.39□□□□□ -0.11
LIMK1P53667 FAM90A5P-201ENST00000528738 1395 ntBASIC14.39□□□□□ -0.11
LIMK1P53667 FAM90A14P-201ENST00000530386 1395 ntBASIC14.39□□□□□ -0.11
LIMK1P53667 FAM90A13P-201ENST00000534703 1395 ntBASIC14.39□□□□□ -0.11
LIMK1P53667 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.39□□□□□ -0.11
LIMK1P53667 ZNF436-AS1-201ENST00000335648 2547 ntBASIC14.39□□□□□ -0.11
LIMK1P53667 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LIMK1P53667 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
LIMK1P53667 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIMK1P53667 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LIMK1P53667 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LIMK1P53667 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.39□□□□□ -0.11
LIMK1P53667 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LIMK1P53667 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.39□□□□□ -0.11
LIMK1P53667 RN7SL396P-201ENST00000471086 295 ntBASIC14.39□□□□□ -0.11
LIMK1P53667 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.39□□□□□ -0.11
LIMK1P53667 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.39□□□□□ -0.11
LIMK1P53667 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.39□□□□□ -0.11
LIMK1P53667 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC14.39□□□□□ -0.11
LIMK1P53667 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.39□□□□□ -0.11
LIMK1P53667 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIMK1P53667 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.39□□□□□ -0.11
LIMK1P53667 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LIMK1P53667 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.39□□□□□ -0.11
LIMK1P53667 AL451007.2-201ENST00000632004 563 ntBASIC14.39□□□□□ -0.11
LIMK1P53667 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
LIMK1P53667 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIMK1P53667 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LIMK1P53667 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LIMK1P53667 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIMK1P53667 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LIMK1P53667 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIMK1P53667 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIMK1P53667 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LIMK1P53667 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.39□□□□□ -0.11
LIMK1P53667 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
LIMK1P53667 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIMK1P53667 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIMK1P53667 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.39□□□□□ -0.11
LIMK1P53667 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIMK1P53667 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
LIMK1P53667 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIMK1P53667 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LIMK1P53667 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.39□□□□□ -0.11
LIMK1P53667 AC139749.1-202ENST00000617529 3139 ntBASIC14.39□□□□□ -0.11
LIMK1P53667 AL138725.1-201ENST00000407347 1314 ntBASIC14.39□□□□□ -0.11
LIMK1P53667 AL360270.3-201ENST00000609118 1348 ntBASIC14.39□□□□□ -0.11
LIMK1P53667 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LIMK1P53667 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LIMK1P53667 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIMK1P53667 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LIMK1P53667 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
LIMK1P53667 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
LIMK1P53667 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIMK1P53667 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIMK1P53667 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIMK1P53667 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.38□□□□□ -0.11
LIMK1P53667 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIMK1P53667 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
LIMK1P53667 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIMK1P53667 AC009090.5-201ENST00000624886 2285 ntBASIC14.38□□□□□ -0.11
LIMK1P53667 AC126365.1-201ENST00000578585 1514 ntBASIC14.38□□□□□ -0.11
LIMK1P53667 COX20P1-201ENST00000366529 357 ntBASIC14.38□□□□□ -0.11
LIMK1P53667 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIMK1P53667 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC14.38□□□□□ -0.11
LIMK1P53667 ACTBP7-201ENST00000418351 1124 ntBASIC14.38□□□□□ -0.11
LIMK1P53667 AQP7P5-201ENST00000428759 1049 ntBASIC14.38□□□□□ -0.11
LIMK1P53667 XBP1P1-201ENST00000436573 652 ntBASIC14.38□□□□□ -0.11
LIMK1P53667 AQP7P4-201ENST00000447083 1042 ntBASIC14.38□□□□□ -0.11
LIMK1P53667 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LIMK1P53667 AL035414.1-201ENST00000451327 857 ntBASIC14.38□□□□□ -0.11
LIMK1P53667 AQP7P2-201ENST00000453967 1041 ntBASIC14.38□□□□□ -0.11
LIMK1P53667 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC14.38□□□□□ -0.11
LIMK1P53667 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LIMK1P53667 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.38□□□□□ -0.11
LIMK1P53667 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC14.38□□□□□ -0.11
LIMK1P53667 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC14.38□□□□□ -0.11
LIMK1P53667 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LIMK1P53667 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC14.38□□□□□ -0.11
LIMK1P53667 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC14.38□□□□□ -0.11
LIMK1P53667 AQP7P3-201ENST00000624547 1041 ntBASIC14.38□□□□□ -0.11
LIMK1P53667 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIMK1P53667 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIMK1P53667 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LIMK1P53667 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIMK1P53667 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.38□□□□□ -0.11
LIMK1P53667 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIMK1P53667 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LIMK1P53667 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
LIMK1P53667 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LIMK1P53667 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LIMK1P53667 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.38□□□□□ -0.11
LIMK1P53667 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.38□□□□□ -0.11
LIMK1P53667 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.38□□□□□ -0.11
LIMK1P53667 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms