Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM38O00635 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM38O00635 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM38O00635 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TRIM38O00635 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.8□□□□□ -0.04
TRIM38O00635 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM38O00635 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM38O00635 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.8□□□□□ -0.04
TRIM38O00635 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRIM38O00635 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM38O00635 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRIM38O00635 AC016700.1-201ENST00000429424 312 ntBASIC14.8□□□□□ -0.04
TRIM38O00635 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.8□□□□□ -0.04
TRIM38O00635 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM38O00635 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM38O00635 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM38O00635 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.8□□□□□ -0.04
TRIM38O00635 AC005730.2-201ENST00000564549 1184 ntBASIC14.8□□□□□ -0.04
TRIM38O00635 ZACNP1-201ENST00000612259 710 ntBASIC14.8□□□□□ -0.04
TRIM38O00635 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.8□□□□□ -0.04
TRIM38O00635 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM38O00635 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM38O00635 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRIM38O00635 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM38O00635 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRIM38O00635 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM38O00635 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM38O00635 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM38O00635 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM38O00635 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM38O00635 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM38O00635 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM38O00635 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM38O00635 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM38O00635 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM38O00635 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.8□□□□□ -0.04
TRIM38O00635 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM38O00635 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM38O00635 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM38O00635 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM38O00635 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM38O00635 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM38O00635 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM38O00635 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM38O00635 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM38O00635 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.79□□□□□ -0.04
TRIM38O00635 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM38O00635 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM38O00635 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM38O00635 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM38O00635 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM38O00635 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM38O00635 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM38O00635 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM38O00635 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM38O00635 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM38O00635 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM38O00635 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM38O00635 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM38O00635 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.79□□□□□ -0.04
TRIM38O00635 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM38O00635 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM38O00635 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.79□□□□□ -0.04
TRIM38O00635 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM38O00635 HIST2H2BB-201ENST00000449108 381 ntBASIC14.79□□□□□ -0.04
TRIM38O00635 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.79□□□□□ -0.04
TRIM38O00635 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM38O00635 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM38O00635 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.79□□□□□ -0.04
TRIM38O00635 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.79□□□□□ -0.04
TRIM38O00635 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.79□□□□□ -0.04
TRIM38O00635 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRIM38O00635 AP001002.3-201ENST00000623482 206 ntBASIC14.79□□□□□ -0.04
TRIM38O00635 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.79□□□□□ -0.04
TRIM38O00635 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM38O00635 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM38O00635 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM38O00635 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM38O00635 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM38O00635 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM38O00635 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM38O00635 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM38O00635 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRIM38O00635 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM38O00635 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM38O00635 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRIM38O00635 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRIM38O00635 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM38O00635 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.78□□□□□ -0.04
TRIM38O00635 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM38O00635 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM38O00635 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
TRIM38O00635 AC015802.1-201ENST00000588104 1449 ntBASIC14.78□□□□□ -0.04
TRIM38O00635 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRIM38O00635 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRIM38O00635 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM38O00635 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM38O00635 CYP46A4P-201ENST00000414953 267 ntBASIC14.78□□□□□ -0.04
TRIM38O00635 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM38O00635 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms