Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AC234783.1-201ENST00000441761 496 ntBASIC17.52■□□□□ 0.4
RNF20Q5VTR2 GAPDHP21-201ENST00000450301 1010 ntBASIC17.52■□□□□ 0.4
RNF20Q5VTR2 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 PPY2P-201ENST00000582808 702 ntBASIC17.52■□□□□ 0.4
RNF20Q5VTR2 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 AC012183.1-201ENST00000625197 499 ntBASIC17.52■□□□□ 0.4
RNF20Q5VTR2 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF20Q5VTR2 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC17.52■□□□□ 0.39
RNF20Q5VTR2 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.52■□□□□ 0.39
RNF20Q5VTR2 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RNF20Q5VTR2 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RNF20Q5VTR2 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF20Q5VTR2 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF20Q5VTR2 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
RNF20Q5VTR2 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF20Q5VTR2 TCAM1P-207ENST00000485295 1537 ntBASIC17.52■□□□□ 0.39
RNF20Q5VTR2 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 CICP12-201ENST00000455801 843 ntBASIC17.51■□□□□ 0.39
RNF20Q5VTR2 CROCCP4-201ENST00000457096 498 ntBASIC17.51■□□□□ 0.39
RNF20Q5VTR2 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 AC023310.1-201ENST00000554836 735 ntBASIC17.51■□□□□ 0.39
RNF20Q5VTR2 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 AL136301.1-201ENST00000615830 422 ntBASIC17.51■□□□□ 0.39
RNF20Q5VTR2 AL162274.1-201ENST00000617191 1098 ntBASIC17.51■□□□□ 0.39
RNF20Q5VTR2 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 C8orf49-201ENST00000525043 1968 ntBASIC17.51■□□□□ 0.39
RNF20Q5VTR2 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF20Q5VTR2 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 AL928921.2-201ENST00000641325 2442 ntBASIC17.5■□□□□ 0.39
RNF20Q5VTR2 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 AC010141.1-201ENST00000411585 623 ntBASIC17.5■□□□□ 0.39
RNF20Q5VTR2 CNN2P10-201ENST00000443067 918 ntBASIC17.5■□□□□ 0.39
RNF20Q5VTR2 CHMP1AP1-201ENST00000445563 662 ntBASIC17.5■□□□□ 0.39
RNF20Q5VTR2 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 HOMER2P2-201ENST00000451621 847 ntBASIC17.5■□□□□ 0.39
RNF20Q5VTR2 KLF2P4-201ENST00000451959 1225 ntBASIC17.5■□□□□ 0.39
RNF20Q5VTR2 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms