Protein–RNA interactions for Protein: P98155

VLDLR, Very low-density lipoprotein receptor, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLRP98155 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.76□□□□□ -0.21
VLDLRP98155 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VLDLRP98155 AC015688.4-201ENST00000580780 1647 ntBASIC13.75□□□□□ -0.21
VLDLRP98155 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VLDLRP98155 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
VLDLRP98155 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VLDLRP98155 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.75□□□□□ -0.21
VLDLRP98155 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.75□□□□□ -0.21
VLDLRP98155 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
VLDLRP98155 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VLDLRP98155 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VLDLRP98155 CU639417.3-201ENST00000624240 1404 ntBASIC13.75□□□□□ -0.21
VLDLRP98155 AL359183.1-201ENST00000623796 2132 ntBASIC13.75□□□□□ -0.21
VLDLRP98155 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.75□□□□□ -0.21
VLDLRP98155 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VLDLRP98155 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.75□□□□□ -0.21
VLDLRP98155 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VLDLRP98155 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
VLDLRP98155 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
VLDLRP98155 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
VLDLRP98155 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VLDLRP98155 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
VLDLRP98155 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VLDLRP98155 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
VLDLRP98155 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
VLDLRP98155 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
VLDLRP98155 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
VLDLRP98155 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.75□□□□□ -0.21
VLDLRP98155 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.75□□□□□ -0.21
VLDLRP98155 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VLDLRP98155 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VLDLRP98155 AC135586.1-201ENST00000539323 574 ntBASIC13.75□□□□□ -0.21
VLDLRP98155 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.75□□□□□ -0.21
VLDLRP98155 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
VLDLRP98155 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.75□□□□□ -0.21
VLDLRP98155 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.75□□□□□ -0.21
VLDLRP98155 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.75□□□□□ -0.21
VLDLRP98155 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VLDLRP98155 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VLDLRP98155 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
VLDLRP98155 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VLDLRP98155 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.75□□□□□ -0.21
VLDLRP98155 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.75□□□□□ -0.21
VLDLRP98155 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VLDLRP98155 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VLDLRP98155 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VLDLRP98155 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VLDLRP98155 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VLDLRP98155 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VLDLRP98155 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VLDLRP98155 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VLDLRP98155 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.75□□□□□ -0.21
VLDLRP98155 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.75□□□□□ -0.21
VLDLRP98155 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VLDLRP98155 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
VLDLRP98155 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VLDLRP98155 AGAP10P-201ENST00000454844 2418 ntBASIC13.74□□□□□ -0.21
VLDLRP98155 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
VLDLRP98155 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
VLDLRP98155 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
VLDLRP98155 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
VLDLRP98155 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
VLDLRP98155 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
VLDLRP98155 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.74□□□□□ -0.21
VLDLRP98155 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.74□□□□□ -0.21
VLDLRP98155 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
VLDLRP98155 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VLDLRP98155 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.74□□□□□ -0.21
VLDLRP98155 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
VLDLRP98155 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VLDLRP98155 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VLDLRP98155 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VLDLRP98155 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.74□□□□□ -0.21
VLDLRP98155 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.74□□□□□ -0.21
VLDLRP98155 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VLDLRP98155 MRPL37P1-201ENST00000592451 1337 ntBASIC13.74□□□□□ -0.21
VLDLRP98155 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VLDLRP98155 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VLDLRP98155 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VLDLRP98155 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VLDLRP98155 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.74□□□□□ -0.21
VLDLRP98155 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
VLDLRP98155 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.74□□□□□ -0.21
VLDLRP98155 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.74□□□□□ -0.21
VLDLRP98155 EIF3FP3-201ENST00000434851 1086 ntBASIC13.74□□□□□ -0.21
VLDLRP98155 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
VLDLRP98155 KRT17P7-201ENST00000451704 1104 ntBASIC13.74□□□□□ -0.21
VLDLRP98155 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
VLDLRP98155 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
VLDLRP98155 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.74□□□□□ -0.21
VLDLRP98155 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.74□□□□□ -0.21
VLDLRP98155 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.74□□□□□ -0.21
VLDLRP98155 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.74□□□□□ -0.21
VLDLRP98155 BRI3BPP1-201ENST00000594224 787 ntBASIC13.74□□□□□ -0.21
VLDLRP98155 AC007431.3-201ENST00000623221 587 ntBASIC13.74□□□□□ -0.21
VLDLRP98155 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.74□□□□□ -0.21
VLDLRP98155 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.74□□□□□ -0.21
VLDLRP98155 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VLDLRP98155 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VLDLRP98155 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms