Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AC073210.1-201ENST00000414799 232 ntBASIC16.07■□□□□ 0.16
CTGFP29279 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC16.07■□□□□ 0.16
CTGFP29279 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC16.07■□□□□ 0.16
CTGFP29279 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC16.07■□□□□ 0.16
CTGFP29279 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC16.07■□□□□ 0.16
CTGFP29279 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC16.07■□□□□ 0.16
CTGFP29279 AC078814.4-201ENST00000546650 327 ntBASIC16.07■□□□□ 0.16
CTGFP29279 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC16.07■□□□□ 0.16
CTGFP29279 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC16.07■□□□□ 0.16
CTGFP29279 AC091304.3-201ENST00000566500 716 ntBASIC16.07■□□□□ 0.16
CTGFP29279 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC16.07■□□□□ 0.16
CTGFP29279 AC006116.2-201ENST00000589958 988 ntBASIC16.07■□□□□ 0.16
CTGFP29279 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC16.07■□□□□ 0.16
CTGFP29279 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC16.07■□□□□ 0.16
CTGFP29279 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC16.07■□□□□ 0.16
CTGFP29279 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC16.07■□□□□ 0.16
CTGFP29279 AC010531.8-201ENST00000623341 685 ntBASIC16.07■□□□□ 0.16
CTGFP29279 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC16.07■□□□□ 0.16
CTGFP29279 ESR1-214ENST00000638569 132 ntTSL 5 BASIC16.07■□□□□ 0.16
CTGFP29279 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC16.07■□□□□ 0.16
CTGFP29279 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC16.07■□□□□ 0.16
CTGFP29279 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTGFP29279 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC16.07■□□□□ 0.16
CTGFP29279 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.07■□□□□ 0.16
CTGFP29279 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CTGFP29279 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CTGFP29279 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTGFP29279 AC232323.1-201ENST00000540724 2099 ntBASIC16.07■□□□□ 0.16
CTGFP29279 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CTGFP29279 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.07■□□□□ 0.16
CTGFP29279 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTGFP29279 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CTGFP29279 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTGFP29279 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTGFP29279 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CTGFP29279 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.07■□□□□ 0.16
CTGFP29279 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.07■□□□□ 0.16
CTGFP29279 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTGFP29279 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
CTGFP29279 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTGFP29279 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTGFP29279 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CTGFP29279 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CTGFP29279 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTGFP29279 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC16.06■□□□□ 0.16
CTGFP29279 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTGFP29279 GOLGA8UP-201ENST00000527159 1755 ntBASIC16.06■□□□□ 0.16
CTGFP29279 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTGFP29279 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CTGFP29279 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTGFP29279 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.06■□□□□ 0.16
CTGFP29279 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CTGFP29279 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CTGFP29279 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CTGFP29279 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTGFP29279 NQO2-204ENST00000380454 851 ntTSL 2 BASIC16.06■□□□□ 0.16
CTGFP29279 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC16.06■□□□□ 0.16
CTGFP29279 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CTGFP29279 HNRNPA1P21-201ENST00000424115 961 ntBASIC16.06■□□□□ 0.16
CTGFP29279 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC16.06■□□□□ 0.16
CTGFP29279 SOD2-205ENST00000444946 917 ntTSL 2 BASIC16.06■□□□□ 0.16
CTGFP29279 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC16.06■□□□□ 0.16
CTGFP29279 NALT1-202ENST00000450304 437 ntTSL 3 BASIC16.06■□□□□ 0.16
CTGFP29279 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CTGFP29279 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC16.06■□□□□ 0.16
CTGFP29279 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC16.06■□□□□ 0.16
CTGFP29279 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC16.06■□□□□ 0.16
CTGFP29279 HNRNPA1P56-201ENST00000505767 954 ntBASIC16.06■□□□□ 0.16
CTGFP29279 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC16.06■□□□□ 0.16
CTGFP29279 BAK1P2-201ENST00000532665 631 ntBASIC16.06■□□□□ 0.16
CTGFP29279 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC16.06■□□□□ 0.16
CTGFP29279 AL359219.1-201ENST00000556311 934 ntBASIC16.06■□□□□ 0.16
CTGFP29279 AC120498.7-201ENST00000562876 330 ntBASIC16.06■□□□□ 0.16
CTGFP29279 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC16.06■□□□□ 0.16
CTGFP29279 AC104506.1-201ENST00000609247 429 ntBASIC16.06■□□□□ 0.16
CTGFP29279 URAHP-205ENST00000610227 398 ntBASIC16.06■□□□□ 0.16
CTGFP29279 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC16.06■□□□□ 0.16
CTGFP29279 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC16.06■□□□□ 0.16
CTGFP29279 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTGFP29279 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTGFP29279 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.06■□□□□ 0.16
CTGFP29279 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
CTGFP29279 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.06■□□□□ 0.16
CTGFP29279 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTGFP29279 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CTGFP29279 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
CTGFP29279 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTGFP29279 AC215219.1-201ENST00000400706 1817 ntBASIC16.05■□□□□ 0.16
CTGFP29279 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTGFP29279 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.05■□□□□ 0.16
CTGFP29279 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC16.05■□□□□ 0.16
CTGFP29279 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTGFP29279 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTGFP29279 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CTGFP29279 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CTGFP29279 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTGFP29279 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CTGFP29279 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CTGFP29279 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTGFP29279 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms