Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.02□□□□□ -0.49
DEFA4P12838 CYMP-203ENST00000474680 1263 ntBASIC12.02□□□□□ -0.49
DEFA4P12838 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.02□□□□□ -0.49
DEFA4P12838 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.02□□□□□ -0.49
DEFA4P12838 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.02□□□□□ -0.49
DEFA4P12838 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.02□□□□□ -0.49
DEFA4P12838 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
DEFA4P12838 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.02□□□□□ -0.49
DEFA4P12838 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.02□□□□□ -0.49
DEFA4P12838 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
DEFA4P12838 BX539320.1-201ENST00000623759 877 ntBASIC12.02□□□□□ -0.49
DEFA4P12838 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
DEFA4P12838 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
DEFA4P12838 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
DEFA4P12838 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
DEFA4P12838 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.02□□□□□ -0.49
DEFA4P12838 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
DEFA4P12838 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.02□□□□□ -0.49
DEFA4P12838 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.02□□□□□ -0.49
DEFA4P12838 AC130686.1-201ENST00000622936 2466 ntBASIC12.02□□□□□ -0.49
DEFA4P12838 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
DEFA4P12838 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.02□□□□□ -0.49
DEFA4P12838 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
DEFA4P12838 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
DEFA4P12838 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
DEFA4P12838 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
DEFA4P12838 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.02□□□□□ -0.49
DEFA4P12838 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
DEFA4P12838 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
DEFA4P12838 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
DEFA4P12838 DRD5P1-201ENST00000456605 1438 ntBASIC12.02□□□□□ -0.49
DEFA4P12838 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
DEFA4P12838 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
DEFA4P12838 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
DEFA4P12838 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
DEFA4P12838 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
DEFA4P12838 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
DEFA4P12838 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
DEFA4P12838 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
DEFA4P12838 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.01□□□□□ -0.49
DEFA4P12838 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
DEFA4P12838 AL157414.3-201ENST00000624276 1954 ntBASIC12.01□□□□□ -0.49
DEFA4P12838 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
DEFA4P12838 AL805961.2-201ENST00000642139 4817 ntBASIC12.01□□□□□ -0.49
DEFA4P12838 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
DEFA4P12838 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
DEFA4P12838 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.01□□□□□ -0.49
DEFA4P12838 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 GNAQP1-201ENST00000444815 1067 ntBASIC12.01□□□□□ -0.49
DEFA4P12838 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.01□□□□□ -0.49
DEFA4P12838 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.01□□□□□ -0.49
DEFA4P12838 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.01□□□□□ -0.49
DEFA4P12838 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.01□□□□□ -0.49
DEFA4P12838 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.01□□□□□ -0.49
DEFA4P12838 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.01□□□□□ -0.49
DEFA4P12838 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.01□□□□□ -0.49
DEFA4P12838 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.01□□□□□ -0.49
DEFA4P12838 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.01□□□□□ -0.49
DEFA4P12838 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.01□□□□□ -0.49
DEFA4P12838 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
DEFA4P12838 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
DEFA4P12838 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
DEFA4P12838 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.01□□□□□ -0.49
DEFA4P12838 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
DEFA4P12838 AC023090.2-201ENST00000625182 2110 ntBASIC12.01□□□□□ -0.49
DEFA4P12838 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
DEFA4P12838 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12□□□□□ -0.49
DEFA4P12838 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
DEFA4P12838 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
DEFA4P12838 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
DEFA4P12838 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12□□□□□ -0.49
DEFA4P12838 AC004899.2-201ENST00000622993 3860 ntBASIC12□□□□□ -0.49
DEFA4P12838 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
DEFA4P12838 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms