Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSSCA1O60232 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SSSCA1O60232 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SSSCA1O60232 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SSSCA1O60232 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSSCA1O60232 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.01□□□□□ -0.49
SSSCA1O60232 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
SSSCA1O60232 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SSSCA1O60232 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.01□□□□□ -0.49
SSSCA1O60232 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSSCA1O60232 AC015688.4-201ENST00000580780 1647 ntBASIC12.01□□□□□ -0.49
SSSCA1O60232 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SSSCA1O60232 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
SSSCA1O60232 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SSSCA1O60232 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.01□□□□□ -0.49
SSSCA1O60232 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSSCA1O60232 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSSCA1O60232 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSSCA1O60232 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SSSCA1O60232 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SSSCA1O60232 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSSCA1O60232 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
SSSCA1O60232 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSSCA1O60232 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.01□□□□□ -0.49
SSSCA1O60232 CEND1P1-201ENST00000451006 455 ntBASIC12.01□□□□□ -0.49
SSSCA1O60232 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.01□□□□□ -0.49
SSSCA1O60232 AL512361.1-201ENST00000554200 418 ntBASIC12.01□□□□□ -0.49
SSSCA1O60232 AC093520.2-201ENST00000561830 333 ntBASIC12.01□□□□□ -0.49
SSSCA1O60232 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
SSSCA1O60232 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSSCA1O60232 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SSSCA1O60232 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.01□□□□□ -0.49
SSSCA1O60232 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.01□□□□□ -0.49
SSSCA1O60232 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.01□□□□□ -0.49
SSSCA1O60232 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.01□□□□□ -0.49
SSSCA1O60232 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSSCA1O60232 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSSCA1O60232 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.01□□□□□ -0.49
SSSCA1O60232 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.01□□□□□ -0.49
SSSCA1O60232 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SSSCA1O60232 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.01□□□□□ -0.49
SSSCA1O60232 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSSCA1O60232 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSSCA1O60232 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SSSCA1O60232 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SSSCA1O60232 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.01□□□□□ -0.49
SSSCA1O60232 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.01□□□□□ -0.49
SSSCA1O60232 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSSCA1O60232 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SSSCA1O60232 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
SSSCA1O60232 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SSSCA1O60232 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
SSSCA1O60232 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.01□□□□□ -0.49
SSSCA1O60232 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
SSSCA1O60232 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SSSCA1O60232 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSSCA1O60232 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.01□□□□□ -0.49
SSSCA1O60232 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SSSCA1O60232 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SSSCA1O60232 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.01□□□□□ -0.49
SSSCA1O60232 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12□□□□□ -0.49
SSSCA1O60232 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12□□□□□ -0.49
SSSCA1O60232 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SSSCA1O60232 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
SSSCA1O60232 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SSSCA1O60232 SALL4P5-201ENST00000419001 1760 ntBASIC12□□□□□ -0.49
SSSCA1O60232 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12□□□□□ -0.49
SSSCA1O60232 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
SSSCA1O60232 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
SSSCA1O60232 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
SSSCA1O60232 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12□□□□□ -0.49
SSSCA1O60232 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12□□□□□ -0.49
SSSCA1O60232 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SSSCA1O60232 ELL2P1-201ENST00000413990 1906 ntBASIC12□□□□□ -0.49
SSSCA1O60232 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SSSCA1O60232 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12□□□□□ -0.49
SSSCA1O60232 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SSSCA1O60232 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12□□□□□ -0.49
SSSCA1O60232 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
SSSCA1O60232 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12□□□□□ -0.49
SSSCA1O60232 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SSSCA1O60232 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12□□□□□ -0.49
SSSCA1O60232 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
SSSCA1O60232 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12□□□□□ -0.49
SSSCA1O60232 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SSSCA1O60232 AL645937.2-201ENST00000396808 931 ntBASIC12□□□□□ -0.49
SSSCA1O60232 MIR940-201ENST00000401276 94 ntBASIC12□□□□□ -0.49
SSSCA1O60232 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12□□□□□ -0.49
SSSCA1O60232 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12□□□□□ -0.49
SSSCA1O60232 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12□□□□□ -0.49
SSSCA1O60232 AL353779.1-201ENST00000434793 351 ntBASIC12□□□□□ -0.49
SSSCA1O60232 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12□□□□□ -0.49
SSSCA1O60232 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SSSCA1O60232 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SSSCA1O60232 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12□□□□□ -0.49
SSSCA1O60232 AC120114.3-201ENST00000611923 658 ntBASIC12□□□□□ -0.49
SSSCA1O60232 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12□□□□□ -0.49
SSSCA1O60232 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12□□□□□ -0.49
SSSCA1O60232 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SSSCA1O60232 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms