Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S1Q92572 TOMM22P5-201ENST00000416399 439 ntBASIC12.97□□□□□ -0.33
AP3S1Q92572 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.97□□□□□ -0.33
AP3S1Q92572 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S1Q92572 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.97□□□□□ -0.33
AP3S1Q92572 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.97□□□□□ -0.33
AP3S1Q92572 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.97□□□□□ -0.33
AP3S1Q92572 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.97□□□□□ -0.33
AP3S1Q92572 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC12.97□□□□□ -0.33
AP3S1Q92572 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.97□□□□□ -0.33
AP3S1Q92572 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S1Q92572 AC064836.3-201ENST00000607928 673 ntBASIC12.97□□□□□ -0.33
AP3S1Q92572 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S1Q92572 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S1Q92572 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
AP3S1Q92572 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S1Q92572 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.97□□□□□ -0.33
AP3S1Q92572 UXT-AS1-201ENST00000590504 1525 ntBASIC12.97□□□□□ -0.33
AP3S1Q92572 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
AP3S1Q92572 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
AP3S1Q92572 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.97□□□□□ -0.33
AP3S1Q92572 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S1Q92572 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S1Q92572 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S1Q92572 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
AP3S1Q92572 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S1Q92572 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S1Q92572 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S1Q92572 AL136172.1-201ENST00000598590 1394 ntBASIC12.96□□□□□ -0.33
AP3S1Q92572 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.96□□□□□ -0.33
AP3S1Q92572 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.96□□□□□ -0.33
AP3S1Q92572 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S1Q92572 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
AP3S1Q92572 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S1Q92572 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.96□□□□□ -0.33
AP3S1Q92572 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S1Q92572 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.96□□□□□ -0.33
AP3S1Q92572 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S1Q92572 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S1Q92572 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S1Q92572 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S1Q92572 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S1Q92572 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.96□□□□□ -0.33
AP3S1Q92572 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.96□□□□□ -0.33
AP3S1Q92572 AC243562.1-201ENST00000560672 389 ntBASIC12.96□□□□□ -0.33
AP3S1Q92572 LINC01225-203ENST00000563550 1244 ntBASIC12.96□□□□□ -0.33
AP3S1Q92572 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.96□□□□□ -0.33
AP3S1Q92572 Z83851.2-201ENST00000609564 659 ntBASIC12.96□□□□□ -0.33
AP3S1Q92572 MIR7706-201ENST00000613747 67 ntBASIC12.96□□□□□ -0.33
AP3S1Q92572 AL773604.1-201ENST00000617417 272 ntBASIC12.96□□□□□ -0.33
AP3S1Q92572 AC055717.3-201ENST00000622967 595 ntBASIC12.96□□□□□ -0.33
AP3S1Q92572 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.96□□□□□ -0.33
AP3S1Q92572 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S1Q92572 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S1Q92572 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC12.96□□□□□ -0.33
AP3S1Q92572 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S1Q92572 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S1Q92572 AL445209.1-201ENST00000607269 3491 ntBASIC12.96□□□□□ -0.33
AP3S1Q92572 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S1Q92572 AP000437.1-201ENST00000624057 2085 ntBASIC12.96□□□□□ -0.33
AP3S1Q92572 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.96□□□□□ -0.33
AP3S1Q92572 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S1Q92572 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.96□□□□□ -0.34
AP3S1Q92572 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
AP3S1Q92572 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
AP3S1Q92572 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
AP3S1Q92572 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
AP3S1Q92572 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
AP3S1Q92572 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
AP3S1Q92572 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
AP3S1Q92572 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S1Q92572 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.95□□□□□ -0.34
AP3S1Q92572 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.95□□□□□ -0.34
AP3S1Q92572 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S1Q92572 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S1Q92572 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
AP3S1Q92572 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
AP3S1Q92572 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S1Q92572 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S1Q92572 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S1Q92572 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.95□□□□□ -0.34
AP3S1Q92572 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S1Q92572 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S1Q92572 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
AP3S1Q92572 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
AP3S1Q92572 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S1Q92572 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.95□□□□□ -0.34
AP3S1Q92572 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S1Q92572 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S1Q92572 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S1Q92572 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S1Q92572 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S1Q92572 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S1Q92572 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.95□□□□□ -0.34
AP3S1Q92572 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S1Q92572 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S1Q92572 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S1Q92572 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S1Q92572 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.95□□□□□ -0.34
AP3S1Q92572 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms